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any mode is missing 5 prime adaptors #32
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I noticed the total read counts after running in That being said, there are still misses, but I think barcodes simply can't be run in It would be very nice if output could be piped to another stage (or even to another invocation of the program), because a typical workflow could be to remove barcodes (and/or demultiplex while removing), then to remove adapters. Presently, this requires separate runs, and the way the files are named (with the automatic append of -trimmed) makes this somewhat painful. |
When provided with 5 prime adaptors of the form (e.g.)
skewer finds and removes them efficiently in mode
-m head
. However, when running in-m any
mode, they are not detected and removed.The text was updated successfully, but these errors were encountered: