KmerDistance

Identifications of genetic similarity or the distance between genomic sequences (In approximate string matching).

Author

Ruslan Kalendar email: ruslan.kalendar@helsinki.fi

Web

Availability and requirements:

Operating system(s): Platform independent

Programming language: Java 23 or higher

Java Downloads

How do I set or change the Java path system variable

To run the project from the command line, go to the target folder and type the following; an individual file or a file folder can be specified:

java -jar KmersPattern.jar <target_file_path/Folder_path>

Basic usage:

java -jar <KmersPatternPath>\dist\KmersPattern.jar <target_file_path> optional_commands

Examples:

java -jar C:\KmersPattern\dist\KmersPattern.jar C:\KmersPattern\test\t1.txt

java -jar C:\KmersPattern\dist\KmersPattern.jar E:\Genomes\Oryza_sativa\