Remove hdmf-docutils as an installation dependency (#6)

CHANGELOG.md

@@ -0,0 +1,12 @@
+# ndx-pose Changelog
+
+## ndx-pose 0.1.1 (January 26, 2022)
+
+The schema is unchanged, but the Python package has been updated.
+
+### Bug fix
+- Remove hdmf-docutils as an installation dependency. @rly (#6)
+
+## ndx-pose 0.1.0 (January 26, 2022)
+
+Initial release including `PoseEstimation` and `PoseEstimationSeries` neurodata types.

docs/source/conf.py

@@ -22,10 +22,10 @@
 author = 'Ryan Ly, Ben Dichter, Alexander Mathis'
 
 # The short X.Y version
-version = '0.1.0'
+version = '0.1.1'
 
 # The full version, including alpha/beta/rc tags
-release = '0.1.0'
+release = '0.1.1'
 
 
 # -- General configuration ---------------------------------------------------

requirements-dev.txt

@@ -1,3 +1,5 @@
 # pinned dependencies to reproduce an entire development environment to run tests and check code style
 flake8==4.0.1
 pytest==6.2.5
+pytest-subtests==0.6.0
+hdmf-docutils==0.4.4

requirements.txt

@@ -1,4 +1,3 @@
 # pinned dependencies to reproduce a working development environment
-hdmf_docutils==0.4.4
 hdmf==3.1.1
 pynwb==2.0.0

setup.py

@@ -22,7 +22,7 @@
 
 setup_args = {
     'name': 'ndx-pose',
-    'version': '0.1.0',
+    'version': '0.1.1',
     'description': 'NWB extension to store pose estimation data',
     'long_description': readme,
     'long_description_content_type': readme_type,
@@ -33,7 +33,6 @@
     'install_requires': [
         'pynwb>=1.5.0,<3',
         'hdmf>=2.5.6,<4',
-        'hdmf-docutils>=0.4.4,<1'
     ],
     'packages': find_packages('src/pynwb', exclude=["tests", "tests.*"]),
     'package_dir': {'': 'src/pynwb'},

spec/ndx-pose.namespace.yaml

@@ -15,4 +15,4 @@ namespaces:
     - SpatialSeries
     - NWBDataInterface
   - source: ndx-pose.extensions.yaml
-  version: 0.1.0
+  version: 0.1.1

src/spec/create_extension_spec.py

@@ -9,7 +9,7 @@ def main():
     ns_builder = NWBNamespaceBuilder(
         doc='NWB extension to store pose estimation data',
         name='ndx-pose',
-        version='0.1.0',
+        version='0.1.1',
         author=['Ryan Ly', 'Ben Dichter', 'Alexander Mathis'],
         contact=['rly@lbl.gov', 'bdichter@lbl.gov', 'alexander.mathis@epfl.ch'],
     )
@@ -157,6 +157,7 @@ def main():
     # export the spec to yaml files in the spec folder
     output_dir = os.path.abspath(os.path.join(os.path.dirname(__file__), '..', '..', 'spec'))
     export_spec(ns_builder, new_data_types, output_dir)
+    print('Spec files generated. Please make sure to rerun `pip install .` to load the changes.')
 
 
 if __name__ == "__main__":