The sugar project aims to provide a lightweight framework to facilitate rapid application development for bioinformatics.
It thus provides classes and functions for working with DNA and RNA sequences, as well as related annotations, and it provides parsers and writers for various file formats using a plugin interface.
- Documentation including a tutorial is available here
- Developer-oriented documentation can be found in the wiki
Use pip, e.g.
pip install rnajena-sugar
Run tests with sugar test.
Other options are described in the documentation.
Contributions are welcome! -- e.g. report or fix bugs, discuss or add features, improve the documentation.