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…ot included anywhere. We should probably update this on the current public download too.
This file is referenced in Modules/compareRefRDM2candRDMs.m, but is not included anywhere.
This file has existed outside the github repository for years, I'm just adding it in.
Include missing exhaustivePermutations file.
- Structure containing Mask image to rsa.defineSearchlight_surface now requires the mask variable (was previous data variable) - Moved readMask to base directory, now is rsa.readMask and can be used to read mask images in the correct format for rsa.defineSearchlight_surface - Moved readSurf to base directory, now is rsa.readSurf - Added surfing functions in +surf package (required for rsa.defineSearchlight_surface) - Fixed calling function to surfing_coords2linvoxelidxs in rsa.defineSearchlight_surface so that Mask is applied when defining searchlights - Modified documentation for a handful of searchlight functions
- Readme.md contains overview of toolbox - Manual in markdown is in rsa_toolbox_manual.md - info.txt contains a link to a primer on using markdown to write formatted text - makepdf.txt contains information on how to compile markdown manual file to create a pdf
…2candRDMs.m, made sure that FDRthreshold doesn't return empty p if nothing gets significant
Edit the color bar setting to make it compatible with Matlab version newer than R2015a.
Edit the color bar setting (compatibility with Matlab versions greater than R2015a).
Fixed bootstrap tests and included BCa and percentile confidence intervals
Many thanks to Markus Aichhorn for reporting this error.
In the original version, dotSize in the MDS plot could not be adjusted by users. Reason identified: The dotSize parameter is stored in userOption instead of localOptions, but the old script mistakenly tried to retrieve the dotSize information from the localOption. I edited the code so that dotSize is now rerived from the correct variable.
Enable dotSize in the MDS plot to be adjustable
added missing functions to searchlight scripts
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