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Add comment to test
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richelbilderbeek committed Dec 30, 2023
1 parent 4791b96 commit e71cdb5
Showing 1 changed file with 8 additions and 1 deletion.
Original file line number Diff line number Diff line change
Expand Up @@ -1634,15 +1634,22 @@ test_that("Tip dating, v2.6", {
test_that("Tip dating with RLN", {

skip("Issue #116. RLN + tipdating")
# Probably needs to get proper IDs and such ...
# Prerequisite for https://github.com/ropensci/babette/issues/90
created <- create_beast2_input(
input_filename = get_beautier_path("Felinecoronavirus_Envelope_1.fas"),
site_model = create_jc69_site_model(),
clock_model = create_rln_clock_model(
mean_clock_rate = 0.001,
mean_rate_prior_distr = create_normal_distr()
),
tree_prior = create_cbs_tree_prior(),
tipdates_filename = get_beautier_path(
"Felinecoronavirus_Envelope_1_no_quotes.txt"
),
beauti_options = create_beauti_options_v2_6()
)
expected <- readLines(get_beautier_path("Felinecoronavirus_Envelope_1.xml"))
expected <- readLines(get_beautier_path("Felinecoronavirus_Envelope_1.xml"))

# Creates temporary files in beautier folder
compare_lines(
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