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v2.6.1

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@richelbilderbeek richelbilderbeek released this 23 Jul 15:59
· 297 commits to master since this release

NEW FEATURES

  • Added check_empty_beautier_folder to make sure
    no temporary files are created

MINOR IMPROVEMENTS

  • None

BUG FIXES

  • None

DEPRECATED AND DEFUNCT

  • Removed all deprecated functions and function arguments
    that warn the user in the current CRAN version (v2.6)
  • Internal functions clock_model_to_xml_prior_distr,
    tipdate_taxa_to_xml_tree, tree_priors_to_xml_operators
    work with infererence_model,
    deprecated other arguments
  • Deprecated internal function clock_models_to_xml_prior_distr,
    redirect user to clock_model_to_xml_prior_distr
  • Deprecated internal function tree_priors_to_xml_operators,
    redirect user to tree_prior_to_xml_operators
  • Deprecated clock_models_to_xml_state,
    redirect user to clock_model_to_xml_state
  • Deprecated clock_models_to_xml_operators,
    redirect user to clock_model_to_xml_operators
  • Deprecated clock_models_to_xml_tracelog,
    redirect user to clock_model_to_xml_tracelog
  • Deprecated mrca_priors_to_xml_tracelog,
    redirect user to mrca_prior_to_xml_tracelog
  • Deprecated tree_models_to_xml_tracelog,
    redirect user to tree_model_to_tracelog_xml