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v2.1.0
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@joelnitta joelnitta released this 31 Aug 07:59
· 36 commits to main since this release
v2.1.0
628d09e

BUG FIXES

  • Fixed bug where restez_status() did not show correct file size (#32)
  • Fixed frequent appearance of "Database is garbage-collected" warning (#33)
  • Skip scanning of gzipped file if zgrep is not detected (3de4f95)

DOCUMENTATION

  • Add "Accession filter" to "Tips and Tricks" (1e30498)
  • Use markdown syntax for roxygen2 (ded1466)

NEW FEATURES

  • Change use of restez_connect() and restez_disconnect(): they are no longer user-facing, and instead get run internally for each instance of connecting to the local database. Also, connection to DB is made in read-only mode, which should allow for multiple simultaneous processes to access the DB (#33, #35)
  • Add ncbi_acc_get() to enable easier querying of GenBank accession numbers (#37, #43)
  • Add max_tries argument to db_download() to automatically re-try download in the event of a drop in internet connectivity (#36, #42)
  • Add dnabin argument to gb_sequence_get() to return sequences in ape DNAbin format (#38, #44)
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