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Releases: rpetit3/pbptyper

v2.0.0

06 Aug 05:01
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Use camlhmp for typing

v1.0.4

20 Sep 21:47
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Improve CLI

v1.0.3

19 Sep 20:42
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  • Added basic SPN check
    • Calculates ANI using fastANI
    • added --min_ani, with a default of 95% ANI to call PBP type
      • samples which fail to meet threshold will get a warning and NOT_SPN as the PBP type
    • a column for ani
  • Added a --check parameter to check for depends
  • updated the readme

v1.0.2

02 Sep 04:29
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  • Loci with perfect matches to multiple alleles not now labeled as "MULTIPLE"
    • A ID will not be determined for these situations and it will be left to the user to decide
  • Add columns
    • a column for bitscores
    • a column for comments
  • updated the readme

v1.0.1

22 Aug 17:35
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Add latest reference data

v1.0.0

03 Aug 16:10
eea57fd
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Initial release of pbptyper