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Fix finalizer segfault #1255

Fix finalizer segfault

Fix finalizer segfault #1255

Workflow file for this run

# Workflow derived from https://github.com/r-lib/actions/tree/master/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
workflow_dispatch:
push:
branches: [main, master]
pull_request:
branches: [main, master]
name: R-CMD-check
jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}
name: OS=${{ matrix.config.os }} R=${{ matrix.config.r }} py=${{ matrix.config.python }}
timeout-minutes: 30
strategy:
fail-fast: false
matrix:
config:
- { os: macOS-latest , r: 'release', python: '3.10' }
- { os: windows-latest, r: 'release', python: '3.10' }
- { os: ubuntu-latest , r: 'release', python: '3.10' }
# test R oldrel on mac too: https://github.com/RcppCore/RcppArmadillo/issues/447
- { os: macOS-latest , r: 'oldrel' , python: '3.10' }
- { os: ubuntu-latest, r: 'oldrel-1', python: '3.9' }
- { os: ubuntu-latest, r: 'oldrel-2', python: '3.9' }
- { os: ubuntu-20.04, r: 'oldrel-3', python: '3.8' }
- { os: ubuntu-20.04, r: 'oldrel-4', python: '3.8' }
# https://api.r-hub.io/rversions/resolve/oldrel/4
- { os: ubuntu-latest, r: 'release', python: '3.7' }
- { os: ubuntu-latest, r: 'release', python: '3.8' }
- { os: ubuntu-latest, r: 'release', python: '3.9' }
- { os: ubuntu-latest, r: 'release', python: '3.11' }
- { os: ubuntu-latest, r: 'release', python: '3.12' }
- { os: ubuntu-latest, r: 'devel', python: '3.12', http-user-agent: 'release' }
# test with one debug build of python
# disabled; failing presently
# - { os: ubuntu-latest , r: 'release', python: 'debug' }
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes
steps:
- uses: actions/checkout@v3
- uses: r-lib/actions/setup-pandoc@v2
- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
use-public-rspm: true
# http-user-agent: ${{ matrix.config.http-user-agent }}
- uses: actions/setup-python@v4
if: matrix.config.python != 'debug'
with:
python-version: ${{ matrix.config.python }}
- if: matrix.config.python == 'debug'
name: setup python3-dbg
run: |
# sudo apt-get update
sudo apt-get install -y python3-dbg python3-pip python3-venv
# sudo rm -f /usr/bin/python3 /usr/bin/python
sudo ln -sf /usr/bin/python3-dbg /usr/bin/python3
sudo ln -sf /usr/bin/python3-dbg /usr/bin/python
- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::rcmdcheck local::.
cache-version: 4
upgrade: 'TRUE'
- name: setup r-reticulate venv
shell: Rscript {0}
run: |
library(reticulate)
path_to_venv <- virtualenv_create(
envname = "r-reticulate",
python = Sys.which("python"), # placed on PATH by the setup-python action
packages = c(
"docutils", "pandas", "scipy", "matplotlib", "ipython",
"tabulate", "plotly", "psutil", "kaleido", "wrapt"
)
)
writeLines(
paste0("RETICULATE_PYTHON=", virtualenv_python(path_to_venv)),
Sys.getenv("GITHUB_ENV"))
- uses: r-lib/actions/check-r-package@v2