some buffering fix attempts

run-house · Sep 11, 2024 · 66b6233 · 66b6233
1 parent 53f8776
commit 66b6233
Showing 1 changed file with 3 additions and 0 deletions.
diff --git a/runhouse/resources/hardware/sky_command_runner.py b/runhouse/resources/hardware/sky_command_runner.py
@@ -181,6 +181,9 @@ def run(
         if self.use_docker_exec:  # RH MODIFIED
             cmd = " ".join(cmd) if isinstance(cmd, list) else cmd
             cmd = f"sudo docker exec {DEFAULT_DOCKER_CONTAINER_NAME} bash -c {shlex.quote(cmd)}"
+        elif self.docker_user:
+            cmd = " ".join(cmd) if isinstance(cmd, list) else cmd
+            cmd = f"conda deactivate && {cmd}"
 
         command_str = self._get_command_to_run(
             cmd,