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Fix SVLEN examplein VCFv4.3, resolves #84
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pd3 committed May 19, 2015
1 parent 672b512 commit 73482c0
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion VCFv4.3.tex
Original file line number Diff line number Diff line change
Expand Up @@ -628,7 +628,7 @@ \subsection{Encoding Structural Variants}
##FORMAT=<ID=CN,Number=1,Type=Integer,Description="Copy number genotype for imprecise events">
##FORMAT=<ID=CNQ,Number=1,Type=Float,Description="Copy number genotype quality for imprecise events">
#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT NA00001
1 2827694 rs2376870 CGTGGATGCGGGGAC C . PASS SVTYPE=DEL;END=2827762;HOMLEN=1;HOMSEQ=G;SVLEN=-68 GT:GQ 1/1:13.9
1 2827694 rs2376870 CGTGGATGCGGGGAC C . PASS SVTYPE=DEL;END=2827708;HOMLEN=1;HOMSEQ=G;SVLEN=-14 GT:GQ 1/1:13.9
2 321682 . T <DEL> 6 PASS SVTYPE=DEL;END=321887;SVLEN=-205;CIPOS=-56,20;CIEND=-10,62 GT:GQ 0/1:12
2 14477084 . C <DEL:ME:ALU> 12 PASS SVTYPE=DEL;END=14477381;SVLEN=-297;CIPOS=-22,18;CIEND=-12,32 GT:GQ 0/1:12
3 9425916 . C <INS:ME:L1> 23 PASS SVTYPE=INS;END=9425916;SVLEN=6027;CIPOS=-16,22 GT:GQ 1/1:15
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