Skip to content

Commit

Permalink
Fix misleading ##pedigreeDB=<url> notation in older VCF specifications
Browse files Browse the repository at this point in the history
PR #88 removed the `<>` from `##pedigreeDB=<url>` in VCFv4.3.tex,
presumably on the grounds that they were merely metasyntactic variable
notation and not intended to appear literally. As some readers still
refer to these older documents, remove the misleading notation here too.
  • Loading branch information
jmarshall committed Jan 6, 2022
1 parent 6f8b89a commit a8e8c2a
Show file tree
Hide file tree
Showing 2 changed files with 4 additions and 4 deletions.
4 changes: 2 additions & 2 deletions VCFv4.1.tex
Original file line number Diff line number Diff line change
Expand Up @@ -136,7 +136,7 @@ \subsubsection{Pedigree field format}
\end{verbatim}
or a link to a database:
\begin{verbatim}
##pedigreeDB=<url>
##pedigreeDB=URL
\end{verbatim}
\subsection{Header line syntax}
The header line names the 8 fixed, mandatory columns. These columns are as follows:
Expand Down Expand Up @@ -893,7 +893,7 @@ \subsubsection{Clonal derivation relationships}
Alternately, if data on the genomes is compiled in a database, a simple pointer can be provided:

\begin{verbatim}
##pedigreeDB=<url>
##pedigreeDB=URL
\end{verbatim}

The most general form of a pedigree line is:
Expand Down
4 changes: 2 additions & 2 deletions VCFv4.2.tex
Original file line number Diff line number Diff line change
Expand Up @@ -153,7 +153,7 @@ \subsubsection{Pedigree field format}
\end{verbatim}
or a link to a database:
\begin{verbatim}
##pedigreeDB=<url>
##pedigreeDB=URL
\end{verbatim}
\subsection{Header line syntax}
The header line names the 8 fixed, mandatory columns. These columns are as follows:
Expand Down Expand Up @@ -910,7 +910,7 @@ \subsubsection{Clonal derivation relationships}
Alternately, if data on the genomes is compiled in a database, a simple pointer can be provided:

\begin{verbatim}
##pedigreeDB=<url>
##pedigreeDB=URL
\end{verbatim}

The most general form of a pedigree line is:
Expand Down

0 comments on commit a8e8c2a

Please sign in to comment.