Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[minor] Change error to warning. #1758

Merged
merged 1 commit into from
Mar 15, 2024

Conversation

whitwham
Copy link
Contributor

It looks like it is meant to be a warning when a sam/cram file is using a CG tag (bam only in the spcec).

Fixes samtools/samtools#2002.

It looks like it was meant to be a warning rather than an error message.
@daviesrob daviesrob merged commit ca0f621 into samtools:develop Mar 15, 2024
9 checks passed
@whitwham whitwham deleted the error_to_warning branch March 27, 2024 16:29
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

CIGAR with 72833 operators at the CG tag
2 participants