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Pull requests list

Fix not passing enough memory to cd-hit
#627 by pascalaldo was closed Nov 5, 2024
1
Fix create_pan_genome_plots.R script
#566 by gallardoalba was merged Apr 21, 2022
3
Remove reference to roary email
#513 by garethpeat was merged Jun 9, 2020 Loading…
fixed error by old pandas version
#507 by stellareichling was merged Sep 26, 2020 Loading…
Fixed version check for cd-hit
#503 by stellareichling was merged Apr 24, 2020 Loading…
Fix warning in roary_plots.py
#482 by hieplpvip was merged Sep 26, 2020 Loading…
Fix cd-hit version check regexp
#473 by tseemann was merged Nov 6, 2019 Loading…
Mark as unmaintained
#471 by puethe was merged Nov 1, 2019 Loading…
Fix issue #458
#459 by andrewjpage was merged Sep 5, 2019 Loading…
added changelog
#432 by ssjunnebo was merged Dec 5, 2018 Loading…
Include tests in README
#430 by ssjunnebo was merged Nov 28, 2018 Loading…
621556 badges
#420 by ssjunnebo was merged Sep 19, 2018 Loading…
Update roary_plots from .ix to .loc
#416 by EvdH0 was merged Aug 16, 2018 Loading…
1
Use only CDS features from GFF
#400 by embatty was merged May 8, 2018 Loading…
also mention Devel::OverloadInfo and Digest::MD5::File as required Perl dependencies
#397 by boegel was merged May 4, 2018 Loading…
1
Avoid deprecation errors in roary_plots
#389 by mgalardini was merged Mar 13, 2018 Loading…
Reduce min gene size
#384 by ssjunnebo was merged Jan 23, 2018 Loading…
Fix dependancy checking option
#382 by andrewjpage was merged Jan 16, 2018 Loading…
Version fix
#379 by andrewjpage was merged Jan 12, 2018 Loading…
fix mafft and kraken version extraction
#378 by andrewjpage was merged Jan 12, 2018 Loading…
Bedtools getfasta format fix
#374 by andrewjpage was merged Jan 10, 2018 Loading…
Update roary_plots.py
#372 by fasnicar was merged Jan 8, 2018 Loading…
1
Issue #363 add check for duplicate basenames
#370 by nickp60 was merged Dec 20, 2017 Loading…
1
README.md: Update Guix install instructions.
#362 by wwood was merged Nov 9, 2017 Loading…
1
change missing gene in core to be dashes rather than Ns
#358 by andrewjpage was merged Oct 10, 2017 Loading…
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