Merge pull request #34 from martinghunt/master

version 0.10.2
sanger-pathogens · Jan 7, 2015 · 0ccf3b9 · 0ccf3b9
2 parents a869c90 + 6983aec
commit 0ccf3b9
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Showing 3 changed files with 3 additions and 3 deletions.
diff --git a/iva/common.py b/iva/common.py
@@ -2,7 +2,7 @@
 import os
 import sys
 import subprocess
-version = '0.10.1'
+version = '0.10.2'
 
 class abspathAction(argparse.Action):
  def __call__(self, parser, namespace, value, option_string):

diff --git a/scripts/iva b/scripts/iva
@@ -167,7 +167,7 @@ if options.pcr_primers:
 fastaq.sequences.Fasta.line_length = original_line_length
 
 if options.contigs:
- contigs = 'contigs.fasta'
+ contigs = 'contigs_to_extend.fasta'
  fastaq.tasks.to_fasta(options.contigs, contigs, line_length=60, strip_after_first_whitespace=True)
 elif options.reference:
  reference = 'reference_in.fasta'

diff --git a/setup.py b/setup.py
@@ -7,7 +7,7 @@ def read(fname):
 
 setup(
  name='iva',
- version='0.10.1',
+ version='0.10.2',
  description='Iterative Virus Assembler',
  long_description=read('README.md'),
  packages = find_packages(),