Change file suffix from _info.yaml to .info.yaml

sanger-tol · Nov 18, 2024 · c9df230 · c9df230
1 parent 22d1bfc
commit c9df230
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Showing 11 changed files with 1 addition and 1 deletion.
diff --git a/src/tola/assembly/scripts/pretext_to_asm.py b/src/tola/assembly/scripts/pretext_to_asm.py
@@ -293,7 +293,7 @@ def write_info_yaml(output_file, stats, out_assemblies, clobber):
         haplotig_count = len(h_asm.scaffolds)
     info["manual_haplotig_removals"] = haplotig_count
 
-    yaml_file = output_file.with_name(output_file.stem + "_info.yaml")
+    yaml_file = output_file.with_name(output_file.stem + ".info.yaml")
     with get_output_filehandle(yaml_file, clobber) as yaml_fh:
         yaml_fh.write(yaml.safe_dump(info, sort_keys=False))
 

diff --git a/...ac1_3/bChlMac1_3-pretext-to-tpf_info.yaml → ...ac1_3/bChlMac1_3-pretext-to-tpf.info.yaml b/...ac1_3/bChlMac1_3-pretext-to-tpf_info.yaml → ...ac1_3/bChlMac1_3-pretext-to-tpf.info.yaml
diff --git a/.../csSphGirg1_1_hr-pretext-to-tpf_info.yaml → .../csSphGirg1_1_hr-pretext-to-tpf.info.yaml b/.../csSphGirg1_1_hr-pretext-to-tpf_info.yaml → .../csSphGirg1_1_hr-pretext-to-tpf.info.yaml
diff --git a/...Irre1/eaAstIrre1-pretext-to-tpf_info.yaml → ...Irre1/eaAstIrre1-pretext-to-tpf.info.yaml b/...Irre1/eaAstIrre1-pretext-to-tpf_info.yaml → ...Irre1/eaAstIrre1-pretext-to-tpf.info.yaml
diff --git a/...Febr1/idDilFebr1-pretext-to-tpf_info.yaml → ...Febr1/idDilFebr1-pretext-to-tpf.info.yaml b/...Febr1/idDilFebr1-pretext-to-tpf_info.yaml → ...Febr1/idDilFebr1-pretext-to-tpf.info.yaml
diff --git a/...Vitr1/idSyrVitr1-pretext-to-tpf_info.yaml → ...Vitr1/idSyrVitr1-pretext-to-tpf.info.yaml b/...Vitr1/idSyrVitr1-pretext-to-tpf_info.yaml → ...Vitr1/idSyrVitr1-pretext-to-tpf.info.yaml
diff --git a/...1_1/ilIthSala1_1-pretext-to-tpf_info.yaml → ...1_1/ilIthSala1_1-pretext-to-tpf.info.yaml b/...1_1/ilIthSala1_1-pretext-to-tpf_info.yaml → ...1_1/ilIthSala1_1-pretext-to-tpf.info.yaml
diff --git a/...Isch1/iyExeIsch1-pretext-to-tpf_info.yaml → ...Isch1/iyExeIsch1-pretext-to-tpf.info.yaml b/...Isch1/iyExeIsch1-pretext-to-tpf_info.yaml → ...Isch1/iyExeIsch1-pretext-to-tpf.info.yaml
diff --git a/...1_1/ngHelPoly1_1-pretext-to-tpf_info.yaml → ...1_1/ngHelPoly1_1-pretext-to-tpf.info.yaml b/...1_1/ngHelPoly1_1-pretext-to-tpf_info.yaml → ...1_1/ngHelPoly1_1-pretext-to-tpf.info.yaml
diff --git a/...1_1/nxCaeSini1_1-pretext-to-tpf_info.yaml → ...1_1/nxCaeSini1_1-pretext-to-tpf.info.yaml b/...1_1/nxCaeSini1_1-pretext-to-tpf_info.yaml → ...1_1/nxCaeSini1_1-pretext-to-tpf.info.yaml
diff --git a/...Spej1/nxCaeSpej1-pretext-to-tpf_info.yaml → ...Spej1/nxCaeSpej1-pretext-to-tpf.info.yaml b/...Spej1/nxCaeSpej1-pretext-to-tpf_info.yaml → ...Spej1/nxCaeSpej1-pretext-to-tpf.info.yaml