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Description
Describe the bug
The crawler can put plate barcodes into the MLWH lighthouse_sample table which contain spurious white space.
Only 25 plate barcode currently have tailing whitespace in the MLWH, which is not many out of 23.3 million rows....
RT Ticket Number
N/A
To Reproduce
Suggested steps to reproduce the behaviour in test:
- Ask crawler to process a file containing plate barcodes with preceding or trailing spaces (see examples below)
- Observe lighthouse_sample table being populated with these
Expected behaviour
I would expect these barcodes to be detected by the crawler and either logged as an error and/or trimmed to remove the spaces.
Screenshots
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Desktop (please complete the following information):
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Additional context
Problem plate barcodes currently in the lighthouse_sample table listed below, generated from
SELECT DISTINCT plate_barcode FROM lighthouse_sample WHERE INSTR(plate_barcode, ' ') > 0;
" RNA008583"
" AP-rna-00115445"
" RNA020797"
"AP-rna-00026995 "
"GLA008074R "
"GLA008028R "
" 002127987"
"GLA010285R "
"AP-rna-00128103 "
" GLA019321R"
" GLA019716R"
" GLA019715R"
" GLA019659R"
" GLA019717R"
" GLA019650R"
" GLA019651R"
"AP-rna-00142151 "
" AP-rna-00145460"
"AP-rna-00146061 "
"AP-rna-00130886 "
"AP-rna-00148159 "
"RNA427769 "
" AP-rna-00152533-rna-00152877"
"AP-rna-00190145 "
"RNA459749 "