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Python3.9 #228

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Fixes #228 and continues in the line of PR #213, Including all pyx, pyd and .c files. Also fixes tests broken by numpy changes. But this is probably not compatible with older python/numpy. Created with python3.9, numpy1.25 and cython3.0

Unfortunately this changes on test from error to failure, presumably
because the test setup is no longer correct.
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MJuddBooth commented Aug 14, 2023

I should note that two tests (and with last push now three) fail. One appears to be precision (perhaps related to my unilateral replacement of int by int64), and another all of the elements on on the matrix lower diagonal are zero vs non-zero in the baseline, which suggests a change in dependent code, while the new one seems to be the test configuration. But I have not investigated any of these, nor do I know if the first two are introduced by my changes.

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