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| name: Test, Documentation and Code Coverage | |
| on: | |
| push: | |
| pull_request: | |
| types: | |
| - closed | |
| branches: | |
| - main | |
| jobs: | |
| run: | |
| name: Build documentation on ${{ matrix.os }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: [ubuntu-latest] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: actions/setup-python@v4 | |
| with: | |
| python-version: '3.11' | |
| - uses: tlylt/install-graphviz@v1 | |
| - name: Install pandoc | |
| run: sudo apt-get install -y pandoc | |
| - name: Install requirements | |
| run: python -m pip install -r requirements.txt | |
| - name: Install requirements dev | |
| run: python -m pip install -r requirements-dev.txt | |
| - name: Cache pip | |
| uses: actions/cache@v2 | |
| with: | |
| path: ~/.cache/pip | |
| key: ${{ runner.os }}-pip-${{ hashFiles('requirements-dev.txt') }} | |
| restore-keys: | | |
| ${{ runner.os }}-pip- | |
| ${{ runner.os }}- | |
| - name: Generate coverage report | |
| run: | | |
| pip install pytest | |
| pip install pytest-cov | |
| export PYTHONPATH=. | |
| pytest --cov=./mlstatpy/ --cov-report=xml --durations=10 --ignore-glob=**LONG*.py --ignore-glob=**notebook*.py | |
| export PYTHONPATH= | |
| - name: test notebooks | |
| run: python -m pytest _unittests/ut_xrun_doc/test_documentation_notebook.py --durations=10 | |
| - name: Upload coverage reports to Codecov | |
| uses: codecov/codecov-action@v3 | |
| env: | |
| CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} | |
| - name: Install | |
| run: python setup.py install | |
| - name: Copy license | |
| run: cp LICENSE* ./_doc | |
| - name: Copy changelogs | |
| run: cp CHANGELOGS* ./_doc | |
| - name: Documentation | |
| run: python -m sphinx ./_doc ./dist/html -n -w doc.txt | |
| - name: Summary | |
| run: cat doc.txt | |
| - name: Check for errors and warnings | |
| run: | | |
| if [[ $(grep ERROR doc.txt) ]]; then | |
| echo "Documentation produces errors." | |
| grep ERROR doc.txt | |
| exit 1 | |
| fi | |
| if [[ $(grep WARNING doc.txt) ]]; then | |
| echo "Documentation produces warnings." | |
| grep WARNING doc.txt | |
| exit 1 | |
| fi | |
| - uses: actions/upload-artifact@v3 | |
| with: | |
| path: ./dist/html/** |