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V2.1.0 systemtests
sebhtml edited this page Oct 30, 2012
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% & numberOfContigs &scaffolds & bases & meanSize & n50 & max & coverage & misassembledContigs & misassembledScaffolds & mismatches & indels coli.Ray & 72 & 67 & 4592984 & 63791 & 114742 & 222309 & 0.9902 & 5 & 0 & 7 & 4 \\ % & numberOfContigs &scaffolds & bases & meanSize & n50 & max & coverage & misassembledContigs & misassembledScaffolds & mismatches & indels coli-interleaved.Ray & 71 & 65 & 4582184 & 64537 & 118479 & 222309 & 0.9899 & 5 & 0 & 7 & 4 \\ % & numberOfContigs &scaffolds & bases & meanSize & n50 & max & coverage & misassembledContigs & misassembledScaffolds & mismatches & indels ecoli-MiSeq.Ray & 86 & 82 & 4583289 & 53294 & 95817 & 269069 & 0.9852 & 1 & 1 & 27 & 25 \\ % & numberOfContigs &scaffolds & bases & meanSize & n50 & max & coverage & misassembledContigs & misassembledScaffolds & mismatches & indels L1-L3.Ray & 11 & 3 & 4684030 & 425820 & 506506 & 1508710 & 1.0000 & 5 & 0 & 72 & 35 \\ % & numberOfContigs &scaffolds & bases & meanSize & n50 & max & coverage & misassembledContigs & misassembledScaffolds & mismatches & indels multiple-peaks.Ray & 5 & 4 & 881713 & 176342 & 614024 & 614024 & 0.9993 & 1 & 0 & 0 & 0 \\ % & numberOfContigs &scaffolds & bases & meanSize & n50 & max & coverage & misassembledContigs & misassembledScaffolds & mismatches & indels pg2.Ray & 6 & 6 & 871450 & 145241 & 612159 & 612159 & 0.9976 & 0 & 0 & 0 & 0 \\ % & numberOfContigs &scaffolds & bases & meanSize & n50 & max & coverage & misassembledContigs & misassembledScaffolds & mismatches & indels phix.Ray & 1 & 1 & 5386 & 5386 & 5386 & 5386 & 1.0000 & 0 & 0 & 0 & 0 \\ % & numberOfContigs &scaffolds & bases & meanSize & n50 & max & coverage & misassembledContigs & misassembledScaffolds & mismatches & i ndels pseudomonas-interleaved-bz2.Ray & 74 & 57 & 6224917 & 84120 & 233788 & 572438 & 0.9964 & 3 & 0 & 1 & 0 \\ % & numberOfContigs &scaffolds & bases & meanSize & n50 & max & coverage & misassembledContigs & misassembledScaffolds & mismatches & i ndels pseudomonas-p.Ray & 103 & 99 & 6220431 & 60392 & 248130 & 580140 & 0.9958 & 0 & 1 & 45 & 2 \\ % & numberOfContigs &scaffolds & bases & meanSize & n50 & max & coverage & misassembledContigs & misassembledScaffolds & mismatches & indels pseudomonas-p-bz2-gz.Ray & 103 & 99 & 6220351 & 60391 & 248130 & 580140 & 0.9958 & 0 & 1 & 45 & 2 \\ % & numberOfContigs &scaffolds & bases & meanSize & n50 & max & coverage & misassembledContigs & misassembledScaffolds & mismatches & indels pseudomonas-s.Ray & 1955 & 1955 & 6032730 & 3085 & 4756 & 29440 & 0.9628 & 1 & 0 & 1 & 0 \\ % & numberOfContigs &scaffolds & bases & meanSize & n50 & max & coverage & misassembledContigs & misassembledScaffolds & mismatches & indels strept.Ray & 104 & 97 & 2000643 & 19236 & 36431 & 128039 & 0.9845 & 0 & 1 & 0 & 0 \\ % & numberOfContigs &scaffolds & bases & meanSize & n50 & max & coverage & misassembledContigs & misassembledScaffolds & mismatches & indels strept-200.Ray & 104 & 97 & 2000678 & 19237 & 36431 & 128039 & 0.9846 & 0 & 1 & 0 & 0 \\ % & numberOfContigs &scaffolds & bases & meanSize & n50 & max & coverage & misassembledContigs & misassembledScaffolds & mismatches & indels strept-300.Ray & 71 & 61 & 2008075 & 28282 & 55479 & 182993 & 0.9839 & 0 & 0 & 1 & 0 \\ % & numberOfContigs &scaffolds & bases & meanSize & n50 & max & coverage & misassembledContigs & misassembledScaffolds & mismatches & indels strept-amos.Ray & 105 & 98 & 2001352 & 19060 & 36431 & 128039 & 0.9845 & 0 & 1 & 0 & 0 \\ % & numberOfContigs &scaffolds & bases & meanSize & n50 & max & coverage & misassembledContigs & misassembledScaffolds & mismatches & indels strept-bz2.Ray & 104 & 97 & 2000650 & 19237 & 36431 & 128039 & 0.9845 & 0 & 1 & 0 & 0 \\ % & numberOfContigs &scaffolds & bases & meanSize & n50 & max & coverage & misassembledContigs & misassembledScaffolds & mismatches & indels strept-interleaved.Ray & 105 & 98 & 2000722 & 19054 & 36431 & 128039 & 0.9846 & 0 & 1 & 0 & 0 \\ % & numberOfContigs &scaffolds & bases & meanSize & n50 & max & coverage & misassembledContigs & misassembledScaffolds & mismatches & indels strept-interleaved-bz2.Ray & 105 & 98 & 2001352 & 19060 & 36431 & 128039 & 0.9845 & 0 & 1 & 0 & 0 \\ % & numberOfContigs &scaffolds & bases & meanSize & n50 & max & coverage & misassembledContigs & misassembledScaffolds & mismatches & indels strept-simulated-errors.Ray & 99 & 82 & 1997709 & 20178 & 37594 & 127936 & 0.9856 & 0 & 0 & 1 & 0 \\