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Hello, I'm trying to update the FeTS Challenge codebase which relied on a much older version of openFL (3 years old). As I'm updating things, some of the imports are hard to map to the current code. One example is this:
I'm not able to find this particular function "aggregation_functions" in an older version
but nor in the old one either so not sure maybe I'm missing something?
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I'm working on making classification work for our updated GaNDLF/OpenFL FeTS codebase (Starting a separate thread in the same discussion to have things more organized) I discovered that apparently the csv files in the plan yaml are never used by the algorithm (https://github.com/Linardos/Challenge/blob/main/Task_1/openfl-workspace/fets_challenge_workspace/plan/plan.yaml#L31-L32 When I commented out lines 31, 32 in plan yaml nothing changed in how the code run. Also it seemed to still be loading segmentation masks as targets, which indicates the "seg_" csv files are hardcoded somewhere and these config parameters were artifacts all along. @kta-intel at some point you figured out these two were generated here in a previous version: https://github.com/Linardos/Challenge/blob/ba5b35bbfe6b0be2033df6eb42df54257f451b93/Task_1/fets_challenge/experiment.py#L313-L314. @psfoley let us know if you have some insight on this EDIT: I figured it out. Where there was one csv generator, I now split to two so it may generate partitions for classification https://github.com/Linardos/Challenge/blob/main/Task_1/fets_challenge/gandlf_csv_adapter.py#L198 I added a print statement for sanity that looks good:
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I'm working on making classification work for our updated GaNDLF/OpenFL FeTS codebase (Starting a separate thread in the same discussion to have things more organized)
I discovered that apparently the csv files in the plan yaml are never used by the algorithm (https://github.com/Linardos/Challenge/blob/main/Task_1/openfl-workspace/fets_challenge_workspace/plan/plan.yaml#L31-L32 When I commented out lines 31, 32 in plan yaml nothing changed in how the code run. Also it seemed to still be loading segmentation masks as targets, which indicates the "seg_" csv files are hardcoded somewhere and these config parameters were artifacts all along.
@kta-intel at some point you figured out these two …