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Expand/collapse controls are too small #848

Closed
ChrisXKeroack opened this issue Jun 30, 2023 · 0 comments · Fixed by #861
Closed

Expand/collapse controls are too small #848

ChrisXKeroack opened this issue Jun 30, 2023 · 0 comments · Fixed by #861
Labels
accessibility Improving accessibility of framework good first issue Good for newcomers

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@ChrisXKeroack
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Describe the bug
Expand/collapse controls are too small

To Reproduce
Steps to reproduce the behavior:

  1. https://openfl.readthedocs.io/en/latest/index.html
  2. Click the link for "manual" to show the expand/collapse controls

Notice: The expand/collapse controls are tiny

Expected behavior
Expand/collapse controls need to meet WCAG guidelines under upcoming guideline for Target Size (i.e. target size of the controls needs to be at least 24x24 CSS pixels (https://w3c.github.io/wcag/guidelines/22/#target-size-minimum)

Desktop:
This issue is not OS or browser specific, but for tracking purposes, testing was done on Win11, in Edge Version 114.0.1823.58 (Official build) (64-bit).

Smartphone:
This issue is not device, OS, or browser specific.

Additional context
This is an accessibility issue, please annotate this bug with the 'accessibility' label.

fstrr added a commit to fstrr/openfl-fs that referenced this issue Jul 5, 2023
This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes securefederatedai#848

Signed-off-by: Francis Storr <francis.storr@intel.com>
@psfoley psfoley added good first issue Good for newcomers accessibility Improving accessibility of framework labels Jul 13, 2023
psfoley pushed a commit that referenced this issue Jul 14, 2023
* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes #848

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
psfoley pushed a commit that referenced this issue Jul 14, 2023
* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes #848

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Color contrast updates for accessibility

Color contrast updates for accessibility
- update generic `a` element
- update color of links in the toggle-able read-the-docs panel
- update the color of the text in search results
- update the color of notes headers

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
ParthMandaliya pushed a commit to ParthMandaliya/openfl that referenced this issue Sep 28, 2023
* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes securefederatedai#848

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
ParthMandaliya pushed a commit to ParthMandaliya/openfl that referenced this issue Sep 28, 2023
* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes securefederatedai#848

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Color contrast updates for accessibility

Color contrast updates for accessibility
- update generic `a` element
- update color of links in the toggle-able read-the-docs panel
- update the color of the text in search results
- update the color of notes headers

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
ParthMandaliya pushed a commit to ParthMandaliya/openfl that referenced this issue Sep 28, 2023
* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes securefederatedai#848

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
ParthMandaliya pushed a commit to ParthMandaliya/openfl that referenced this issue Sep 28, 2023
* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes securefederatedai#848

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Color contrast updates for accessibility

Color contrast updates for accessibility
- update generic `a` element
- update color of links in the toggle-able read-the-docs panel
- update the color of the text in search results
- update the color of notes headers

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
ParthMandaliya pushed a commit to ParthMandaliya/openfl that referenced this issue Sep 28, 2023
* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes securefederatedai#848

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
ParthMandaliya pushed a commit to ParthMandaliya/openfl that referenced this issue Sep 28, 2023
* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes securefederatedai#848

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Color contrast updates for accessibility

Color contrast updates for accessibility
- update generic `a` element
- update color of links in the toggle-able read-the-docs panel
- update the color of the text in search results
- update the color of notes headers

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
ParthMandaliya pushed a commit to ParthMandaliya/openfl that referenced this issue Sep 28, 2023
* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes securefederatedai#848

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
ParthMandaliya added a commit to ParthMandaliya/openfl that referenced this issue Oct 4, 2023
Squashed commit of the following:

commit 5e575c6
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Fri Sep 29 17:31:52 2023 +0530

    Added weighted_average aggregation function under openfl.experimental.interface.{keras,torch}.aggregation_funtions

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit e2e811f
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Thu Sep 28 20:57:48 2023 +0530

    Fixed flake8 issues

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit c947e11
Merge: 85e7578 11db127
Author: ParthM-GitHub <parthx.mandaliya@intel.com>
Date:   Fri Sep 29 00:17:58 2023 +0530

    Merge branch 'develop' into workspace-creator

commit 11db127
Author: Amit Portnoy <1131991+amitport@users.noreply.github.com>
Date:   Thu Sep 28 21:34:13 2023 +0300

    Update EdenPipeline in the documentation (securefederatedai#877)

    Signed-off-by: Amit Portnoy <1131991+amitport@users.noreply.github.com>

commit 85e7578
Author: Keerti Prakash Talwar <115972088+KeertiX@users.noreply.github.com>
Date:   Sat Jul 15 01:39:53 2023 +0530

    Testflow for verifying stdout redirection to Metaflow datastore (securefederatedai#758)

    * implemented ray.wait

    * reverted changes back after testing

    * adding datastore cli test case

    * removed unused variables

    * removed stderr validation

    * fixed lint suggestions

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 9a51a5d
Author: Kevin Ta <116312994+kta-intel@users.noreply.github.com>
Date:   Fri Jul 14 12:53:08 2023 -0400

    fixing FedAvg in workflow interface tutorials to be compatible with latest numpy stable release (1.24.3) (securefederatedai#833)

    * fixing FedAvg averaging in order to be compatible with numpy v1.24+

    Signed-off-by: kta-intel <kevin.ta@intel.com>

    * uncommenting installations for consistency with other tutorials

    Signed-off-by: kta-intel <kevin.ta@intel.com>

    * fixing 301_MNIST_Watermarking tutorial FedAvg

    Signed-off-by: kta-intel <kevin.ta@intel.com>

    * fixing 301_MNIST_Watermarki
    ng tutorial FedAvg

    Signed-off-by: kta-intel <kevin.ta@intel.com>

    * Switching to py38 kernel and clearing cell outputs

    Signed-off-by: kta-intel <kevin.ta@intel.com>

    ---------

    Signed-off-by: kta-intel <kevin.ta@intel.com>
    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 8c20e73
Author: Francis Storr <francis.storr@intel.com>
Date:   Fri Jul 14 09:50:49 2023 -0700

    Accessibility updates (securefederatedai#861)

    * Fix incorrectly formatted link in docs

    Signed-off-by: Francis Storr <francis.storr@intel.com>

    * Font styling, color contrast, other accessibility updates

    This update:
    1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
    2. Adds colors (in `colors.css`)
    3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

    Closes securefederatedai#848

    Signed-off-by: Francis Storr <francis.storr@intel.com>

    ---------

    Signed-off-by: Francis Storr <francis.storr@intel.com>
    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 6fb141b
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Thu Sep 28 20:00:46 2023 +0530

    Fixed flake8 issues in test/experimental directory

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit cd49915
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Thu Sep 28 18:24:02 2023 +0530

    Fixed flake8 issues

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 99c1d5d
Author: Patrick Foley <patrick.foley@intel.com>
Date:   Thu Sep 21 09:37:50 2023 -0700

    Migrate to Ubuntu 22.04 LTS release (supported through 2027) (securefederatedai#875)

    Signed-off-by: Patrick Foley <psfoley@gmail.com>
    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit a0368ad
Author: Patrick Foley <patrick.foley@intel.com>
Date:   Thu Sep 14 16:54:11 2023 -0700

    Resolve Coverity Issues (securefederatedai#874)

    * Fix coverity issues

    * Resolve remaining coverity issues

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 34b704b
Author: Mansi Sharma <77758170+mansishr@users.noreply.github.com>
Date:   Tue Aug 29 15:35:45 2023 -0700

    Add FL plan description to documentation (securefederatedai#872)

    * Add plan description to documentation

    Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

    * fix indentation

    Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

    * Apply suggestions from code review

    Co-authored-by: Patrick Foley <patrick.foley@intel.com>

    ---------

    Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>
    Co-authored-by: Patrick Foley <patrick.foley@intel.com>
    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 1c7ccc6
Author: Patrick Foley <patrick.foley@intel.com>
Date:   Fri Aug 25 16:33:55 2023 -0700

    Update Tensorflow, gRPC, Protobuf dependencies (securefederatedai#868)

    * Update Tensorflow to latest, finally update grpcio/protobuf

    Signed-off-by: Patrick Foley <psfoley@gmail.com>

    * Lint issue fix and missing tf reference

    Signed-off-by: Patrick Foley <psfoley@gmail.com>

    * pyzmq version fixed

    * fix taskrunner tests for windows

    Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

    * fix taskrunner test syntax for windows

    Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

    * adding user option to workspace pip install requirements for windows

    Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

    * fix windows CI test

    Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

    * testing virtual env for windows github actions

    Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

    * testing virtual env for windows github actions

    Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

    * testing virtual env for windows github actions

    Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

    * testing venv for windows

    Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

    * test venv for windows

    * test venv for windows

    * Added new KerasSerializer. Fixed other Interactive API experiments

    * Update taskrunner.yml

    * Update taskrunner.yml

    * Update workspace.py

    * Update workspace.py

    * Update taskrunner.yml

    * Remove get_model import from global namespace so dependencies are not loaded into memory unnecessarily (breaking windows build)

    * Refactoring and cleaning up imports to support Windows install

    * Fixed logger import paths

    * Fix missing imports

    * Fix native import

    * Fix lint errors

    * Fix keras optimizer patch. Remove irrelevant unit test

    * Format logs in UTF-8 for windows

    * Update interactive-kvasir.yml

    * Consolidate github actions python versions to single file

    * Update python versions

    * Update python versions

    * Update python versions

    * Reduce # of DataLoader workers for Pytorch Kvasir CI test

    * Fix Windows encoding

    * Fix Windows encoding and limit rounds so Github Actions CI doesn't run out of memory

    Signed-off-by: Patrick Foley <psfoley@gmail.com>

    * Fix windows encoding

    * Fix Windows encoding

    ---------

    Signed-off-by: Patrick Foley <psfoley@gmail.com>
    Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>
    Co-authored-by: Mansi Sharma <77758170+mansishr@users.noreply.github.com>
    Co-authored-by: Mansi Sharma <mansi.sharma@intel.com>
    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 1b06e60
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Thu Sep 28 18:00:52 2023 +0530

    Added libraries required by WorkspaceBuilder

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit c48c464
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Thu Sep 28 17:06:13 2023 +0530

    Added documentation and inline comments for workspace_builder

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 5ae301d
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Wed Sep 27 15:20:22 2023 +0530

    Removed unnecessary files from template_workspace directory
    Moved print_tree to after generating python script

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 8300e84
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Tue Sep 26 18:57:49 2023 +0530

    Modified workspace_builder/build.py file to resolve a typo

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 83a6567
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Tue Sep 26 18:53:31 2023 +0530

    Modified get_collaborator_args function

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 388cd0e
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Tue Sep 26 18:38:40 2023 +0530

    * Created get_collaborator_kwargs function in localruntime class which takes collaborator name as argument and returns name of private attributes function and arguments required to call it.
    * Changed workspace builder code used get_collaborator_kwargs function to build data.yaml file.

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 38d1015
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Mon Sep 25 11:29:24 2023 +0530

    Removing round number constant argument from 301 MNIST WATERMARKING

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 3c4fd3a
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Fri Sep 22 17:43:01 2023 +0530

    Finished exporting data.yaml, plan.yaml.
    Workspace creator validated for 101 MNIST and 301 Watermarking with MNIST

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit dba24af
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Sat Sep 16 07:03:33 2023 +0530

    workspace_creator renamed to workspace_builder
    finding values without help of any tags

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 20068be
Author: Parth Mandaliya <parth.mandaliya.007@gmail.com>
Date:   Wed Sep 13 10:26:09 2023 +0530

    Removed automatically generated Zone.Identifier file
    Added Approach2 notebook
    Modified creator.py

    Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 1f3750a
Author: Parth Mandaliya <parth.mandaliya.007@gmail.com>
Date:   Tue Sep 12 06:09:38 2023 +0530

    Modifying arguments help

    Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 2c7720c
Author: Parth Mandaliya <parth.mandaliya.007@gmail.com>
Date:   Tue Sep 12 06:05:52 2023 +0530

    Find aggregator, and collaborator arguments

    Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 1b4ebfc
Author: Parth Mandaliya <parth.mandaliya.007@gmail.com>
Date:   Tue Sep 12 05:59:02 2023 +0530

    Write flow.py, collaborator_private_attrs.py and aggregator_private_attrs.py automatically

    Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 0a52b4a
Author: Parth Mandaliya <parth.mandaliya.007@gmail.com>
Date:   Tue Sep 12 04:02:35 2023 +0530

    Adding functionality to convert jupyter notebook to workspace (in progress)

    Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit d2ad1a9
Author: ParthM-GitHub <parthx.mandaliya@intel.com>
Date:   Wed Sep 6 18:50:41 2023 +0530

    Update flow.py

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 1c53e30
Author: ParthM-GitHub <parthx.mandaliya@intel.com>
Date:   Wed Sep 6 18:47:45 2023 +0530

    Update flow.py

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 07f283f
Author: ParthM-GitHub <parthx.mandaliya@intel.com>
Date:   Wed Sep 6 13:42:26 2023 +0530

    Update data.yaml

    Correcting a mistake train dataset assigned to test and vice versa.

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 265bf82
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Thu Aug 31 19:31:25 2023 +0530

    This commit brings following changes:
    1. Added 501_pytorch_tinyimagenet_transfer_learning workspace for experimental workflow interface
    2. Removed `feature_shape` from openfl/experimental/interface/cli/plan.py
    3. Resolved flake8 errors in openfl-workspace/experimental directory

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 856fadb
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Wed Aug 30 20:04:56 2023 +0530

    This commit brings following updates:
    1. Remove unnecessary spaces from Workflow_Interface_102_Aggregator_Validation.ipynb
    2. Upgraded protobuf to 3.20.3 in setup.py as per tensorboard requirements
    3. Modified 101-torch-cnn-mnist workspace for n-level arguments
    4. Added a federated runtime workspace for 102-aggregator-validation

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 4a68b40
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Tue Aug 29 15:56:58 2023 +0530

    Updated logs to provide exact information to user.

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 6a4ce82
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Mon Aug 28 19:45:06 2023 +0530

    Resolving last few TODO items.

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit fb4effa
Author: ParthM-GitHub <parthx.mandaliya@intel.com>
Date:   Mon Aug 28 15:25:35 2023 +0530

    Update workflow_interface.rst

    Added section on how to save best and last model from Metaflow CLI

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 52f0b52
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Fri Aug 25 18:44:30 2023 +0530

    Adding N-level arguments functionality

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 880b7a3
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Thu Aug 24 17:56:22 2023 +0530

    Moving the logs after data.yaml warning, and removing unnecessary blank lines.

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit de2e333
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Wed Aug 23 17:37:40 2023 +0530

    Resolved flake8 issues,
    Added warning statements when data.yaml is not found or aggregator / collaborator private attributes are not found in data.yaml,
    Tested by running all tutorials and tests

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit a2ceb05
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Mon Aug 21 14:42:10 2023 +0530

    Fixed flake8 issues and typos

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 36810fe
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Mon Aug 21 13:36:11 2023 +0530

    With this commit path of template can be explicitely given, user does not have to
    choose from available example templates. Only applicable to experimental openfl.

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit baf45f6
Author: ParthM-GitHub <parthx.mandaliya@intel.com>
Date:   Wed Aug 16 19:01:39 2023 +0530

    Updating import statement

    In 104 keras workspace utils.py updating import SummaryWriter statement from torch to tensorflow

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 0aa070f
Author: ParthM-GitHub <parthx.mandaliya@intel.com>
Date:   Fri Aug 11 20:03:17 2023 +0530

    Update resources.py

    Updated get_number_of_gpus function

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 522a28c
Author: ParthM-GitHub <parthx.mandaliya@intel.com>
Date:   Fri Aug 11 18:37:39 2023 +0530

    Update Workflow_Interface_104_Keras_MNIST_with_GPU.ipynb

    Removing GPU parameter from collaborator decorator.

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 2f4c26e
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Fri Aug 11 14:57:50 2023 +0530

    Files added required to test experimental aggregator based workflow by GitHUB actions

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 4545663
Author: ParthM-GitHub <parthx.mandaliya@intel.com>
Date:   Fri Aug 11 11:24:25 2023 +0530

    Update Workflow_Interface_VFL_Two_Party

    Added actor related changed to Workflow_Interface_VFL_Two_Party

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 5a89b19
Author: ParthM-GitHub <parthx.mandaliya@intel.com>
Date:   Thu Aug 10 16:01:28 2023 +0530

    Update requirements_privacy_meter.txt

    torch 1.13.1 requires torchvision 0.14.1 not 0.14.0

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit e5774b1
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Thu Aug 10 13:37:24 2023 +0530

    Added color escape sequences to datastore cli localruntime and workspace testcases

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 02cc8bd
Author: ParthM-GitHub <parthx.mandaliya@intel.com>
Date:   Wed Aug 9 16:41:50 2023 +0530

    Update stream_redirect.py

    Removing unnecessary imports

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 5d9dc60
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Tue Aug 8 16:32:09 2023 +0530

    Removing unnecessary comments

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 6722bf7
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Tue Aug 8 16:18:57 2023 +0530

    Removing unnecessary deepcopies from aggregator.py file

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 9cc04a4
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Tue Aug 8 16:16:53 2023 +0530

    While taking aggregator step remove private attributes before taking checkpoint and set it back to ctx after checkpoint

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 8b64790
Author: porteratzo <44075849+porteratzo@users.noreply.github.com>
Date:   Fri Aug 4 16:48:04 2023 -0600

    pinned tensorboardX (securefederatedai#870)

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 81b9ef0
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Thu Aug 3 17:54:18 2023 +0530

    Added dependecies to each tutorial notebooks

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit bfa3d39
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Thu Aug 3 14:37:30 2023 +0530

    Incoporated review comments

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 07218ce
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Thu Aug 3 13:20:38 2023 +0530

    Avoided deep copying the context by removing private attributes from context before checkpoint

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 8a40e91
Author: ParthM-GitHub <parthx.mandaliya@intel.com>
Date:   Thu Aug 3 10:55:39 2023 +0530

    Update collaborator.py

    Removing unnecessary logs

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit d1bd2ad
Author: ParthM-GitHub <parthx.mandaliya@intel.com>
Date:   Thu Aug 3 10:52:05 2023 +0530

    Removing unnecessary logs

    Removing unnecessary logs

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit a04b8e8
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Wed Aug 2 18:06:49 2023 +0530

    This comming brings following changes:
    1. Experimental Aggregator workflow testcases moved to test/github/experimental/workspace directory
    2. Added dependecy related changes

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 54be758
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Wed Aug 2 10:53:25 2023 +0530

    Modified 104 Keras MNIST tutorial

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit a7c99da
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Tue Aug 1 14:49:03 2023 +0530

    This commit brings following changes:
    1. Renamed Workflow_Interface_101_Keras_MNIST_with_GPU.ipynb to Workflow_Interface_104_Keras_MNIST_with_GPU.ipynb
    2. Updated documentation in Workflow_Interface_104_Keras_MNIST_with_GPU.ipynb
    3. protobuf bumped from 3.19.6 to 3.20.0 in setup.py
    4. Incorporating review comments (WIP)

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit edd2f55
Author: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Date:   Thu Jul 27 13:55:52 2023 -0700

    build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/tf_2dunet (securefederatedai#774)

    * build(deps): bump tensorflow in /openfl-workspace/tf_2dunet

    Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
    - [Release notes](https://github.com/tensorflow/tensorflow/releases)
    - [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
    - [Commits](tensorflow/tensorflow@v2.8.4...v2.11.1)

    ---
    updated-dependencies:
    - dependency-name: tensorflow
      dependency-type: direct:production
    ...

    Signed-off-by: dependabot[bot] <support@github.com>

    * Update requirements.txt

    to retrigger CI

    * Update requirements.txt

    ---------

    Signed-off-by: dependabot[bot] <support@github.com>
    Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
    Co-authored-by: Kevin Ta <116312994+kta-intel@users.noreply.github.com>
    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 32c7f34
Author: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Date:   Tue Jul 25 14:48:35 2023 -0700

    build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /tests/github/interactive_api_director/experiments/tensorflow_mnist/envoy (securefederatedai#772)

    * build(deps): bump tensorflow

    Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
    - [Release notes](https://github.com/tensorflow/tensorflow/releases)
    - [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
    - [Commits](tensorflow/tensorflow@v2.8.4...v2.11.1)

    ---
    updated-dependencies:
    - dependency-name: tensorflow
      dependency-type: direct:production
    ...

    Signed-off-by: dependabot[bot] <support@github.com>

    * Update sd_requirements.txt

    * revert to legacy SGD and install tensorflow==2.11 for workflow

    Signed-off-by: kta-intel <kevin.ta@intel.com>

    ---------

    Signed-off-by: dependabot[bot] <support@github.com>
    Signed-off-by: kta-intel <kevin.ta@intel.com>
    Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
    Co-authored-by: Patrick Foley <patrick.foley@intel.com>
    Co-authored-by: kta-intel <kevin.ta@intel.com>
    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 292cb2e
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Sat Jul 29 12:03:14 2023 +0530

    This commit brings following changes:

    1. Removed torch dependency from "get_number_of_gpus"
    2. Added keras mnist example notebook
    3. Added keras mnist workspace example
    4. Removed openfl-workspace/experimental/experimental-requirements.txt
    5. "fx aggregator start" command will install libraries from experimental tutorials requirements_workflow_interface.txt file
    6. Added testcase_datastore_cli, testcase_reference and testcase_reference_with_include_exclude
    7. Updated 101 torch mnist plan.yaml and data.yaml
    8. Removed aggregator start flow thread from cli/aggregator.py
    9. At last changes made in federated runtime

    Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 4d7d995
Author: ParthM-GitHub <parthx.mandaliya@intel.com>
Date:   Mon Jul 24 11:28:39 2023 +0530

    Modified get_number_of_gpus function

    Modify get_number_of_gpus function

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit cd7955f
Author: ParthM-GitHub <parthx.mandaliya@intel.com>
Date:   Fri Jul 21 18:01:14 2023 +0530

    Update resources.py

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 69232cf
Author: ParthM-GitHub <parthx.mandaliya@intel.com>
Date:   Fri Jul 21 04:18:53 2023 +0530

    Update 101 tutorial data.yaml

    Updated 101 tutorials data.yaml to correct a mistake by in index parameter of private attribute function.

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 023a573
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Fri Jul 21 03:45:27 2023 +0530

    Excluding 'experimental' directory from workspace templates

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 618d947
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Fri Jul 21 03:18:15 2023 +0530

    Modified 101, 102, 103, 301, 401 tutorials as per Aggregator, & Collaborator stateful collaborators

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 0deaac7
Author: ParthM-GitHub <parthx.mandaliya@intel.com>
Date:   Fri Jul 21 02:53:49 2023 +0530

    Updating 201 GPUs tutorial

    Updated Workflow_Interface_201_Exclusive_GPUs_with_Ray.ipynb for Aggregator, and Collaborator as stateful actor

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 6eda625
Author: ParthM-GitHub <parthx.mandaliya@intel.com>
Date:   Fri Jul 21 02:35:59 2023 +0530

    Update requirements_workflow_interface.txt

    Updated experimental tutorials requirements.txt file

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 6c7ca1d
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Fri Jul 21 02:20:49 2023 +0530

    Delete openfl/experimental/utilities/utils.py, and removed torch depency from openfl/experimental/utilities/resources.py

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit e87dbcf
Author: ParthM-GitHub <parthx.mandaliya@intel.com>
Date:   Thu Jul 20 14:27:12 2023 +0530

    Update requirements_workflow_interface.txt

    Metaflow, and Ray dependencies are moved to openfl-workspace/experimental/experimental-requrirements.txt file.

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 911a734
Author: ParthM-GitHub <parthx.mandaliya@intel.com>
Date:   Thu Jul 20 14:12:19 2023 +0530

    Update experimental-requirements.txt

    Added ray 2.2.0 to experimental-requirements.txt file

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit defe192
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Thu Jul 20 14:04:12 2023 +0530

    Install experimental requirements while activating experimental openfl commands.

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 1154962
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Thu Jul 20 13:45:00 2023 +0530

    While activating experimental OpenFL commands, install depedencies as well.

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 3609303
Author: ParthM-GitHub <parthx.mandaliya@intel.com>
Date:   Wed Jul 19 21:26:53 2023 +0530

    FQDN switched to localhost

    FQDN switched to localhost

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 04e5297
Author: ParthM-GitHub <parthx.mandaliya@intel.com>
Date:   Wed Jul 19 19:36:56 2023 +0530

    Update aggregator.py

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit b1b641e
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Wed Jul 19 17:07:10 2023 +0530

    Modifying temp.sh for 2 collaborators.

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 1839223
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Wed Jul 19 16:39:06 2023 +0530

    plan.yaml modified in 301 watermarking, and subset of collaborators.

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 7b5d2fd
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Wed Jul 19 16:04:44 2023 +0530

    Added following tutorials, and testcase:
    1. Vertical FL
    2. Vertical FL Two Party
    3. Internal Loop

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 778294c
Author: ParthM-GitHub <parthx.mandaliya@intel.com>
Date:   Wed Jul 19 14:12:25 2023 +0530

    External Loop Functionality Added

    External Loop Functionality Added

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit b67b725
Author: ParthM-GitHub <parthx.mandaliya@intel.com>
Date:   Wed Jul 19 14:11:49 2023 +0530

    External Loop Functionality Added

    External Loop Functionality Added

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit cdb8729
Author: ParthM-GitHub <parthx.mandaliya@intel.com>
Date:   Wed Jul 19 14:10:49 2023 +0530

    External Loop Functionality Added

    External Loop Functionality Added

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit f5bdb07
Author: Francis Storr <francis.storr@intel.com>
Date:   Fri Jul 14 14:49:03 2023 -0700

    Tweak link color so it’s not so aggressive (securefederatedai#865)

    Signed-off-by: Francis Storr <francis.storr@intel.com>
    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit b2bc10a
Author: Keerti Prakash Talwar <115972088+KeertiX@users.noreply.github.com>
Date:   Sat Jul 15 01:39:53 2023 +0530

    Testflow for verifying stdout redirection to Metaflow datastore (securefederatedai#758)

    * implemented ray.wait

    * reverted changes back after testing

    * adding datastore cli test case

    * removed unused variables

    * removed stderr validation

    * fixed lint suggestions

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 7666bfe
Author: Francis Storr <francis.storr@intel.com>
Date:   Fri Jul 14 13:09:03 2023 -0700

    Accessibility color contrast fixes (securefederatedai#864)

    * Fix incorrectly formatted link in docs

    Signed-off-by: Francis Storr <francis.storr@intel.com>

    * Font styling, color contrast, other accessibility updates

    This update:
    1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
    2. Adds colors (in `colors.css`)
    3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

    Closes securefederatedai#848

    Signed-off-by: Francis Storr <francis.storr@intel.com>

    * Color contrast updates for accessibility

    Color contrast updates for accessibility
    - update generic `a` element
    - update color of links in the toggle-able read-the-docs panel
    - update the color of the text in search results
    - update the color of notes headers

    Signed-off-by: Francis Storr <francis.storr@intel.com>

    ---------

    Signed-off-by: Francis Storr <francis.storr@intel.com>
    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 7308c1e
Author: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Date:   Fri Jul 14 12:03:04 2023 -0700

    build(deps): bump tensorflow-cpu from 2.8.4 to 2.11.1 in /openfl-workspace/keras_nlp_gramine_ready (securefederatedai#769)

    * build(deps): bump tensorflow-cpu

    Bumps [tensorflow-cpu](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
    - [Release notes](https://github.com/tensorflow/tensorflow/releases)
    - [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
    - [Commits](tensorflow/tensorflow@v2.8.4...v2.11.1)

    ---
    updated-dependencies:
    - dependency-name: tensorflow-cpu
      dependency-type: direct:production
    ...

    Signed-off-by: dependabot[bot] <support@github.com>

    * Use legacy RMSprop optimizer

    Signed-off-by: Patrick Foley <psfoley@gmail.com>

    ---------

    Signed-off-by: dependabot[bot] <support@github.com>
    Signed-off-by: Patrick Foley <psfoley@gmail.com>
    Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
    Co-authored-by: Patrick Foley <psfoley@gmail.com>
    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 3313f6e
Author: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Date:   Fri Jul 14 11:52:42 2023 -0700

    build(deps): bump tensorflow from 2.9.3 to 2.11.1 in /openfl-tutorials/interactive_api/Flax_CNN_CIFAR (securefederatedai#775)

    * build(deps): bump tensorflow

    Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
    - [Release notes](https://github.com/tensorflow/tensorflow/releases)
    - [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
    - [Commits](tensorflow/tensorflow@v2.9.3...v2.11.1)

    ---
    updated-dependencies:
    - dependency-name: tensorflow
      dependency-type: direct:production
    ...

    Signed-off-by: dependabot[bot] <support@github.com>

    * Fixed breaking backages

    Signed-off-by: Patrick Foley <psfoley@gmail.com>

    * Add quiet flag back to pip install

    Signed-off-by: Patrick Foley <psfoley@gmail.com>

    ---------

    Signed-off-by: dependabot[bot] <support@github.com>
    Signed-off-by: Patrick Foley <psfoley@gmail.com>
    Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
    Co-authored-by: Patrick Foley <psfoley@gmail.com>
    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit fea6684
Author: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Date:   Fri Jul 14 10:53:59 2023 -0700

    build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_cnn_with_compression (securefederatedai#770)

    * build(deps): bump tensorflow

    Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
    - [Release notes](https://github.com/tensorflow/tensorflow/releases)
    - [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
    - [Commits](tensorflow/tensorflow@v2.8.4...v2.11.1)

    ---
    updated-dependencies:
    - dependency-name: tensorflow
      dependency-type: direct:production
    ...

    Signed-off-by: dependabot[bot] <support@github.com>

    Signed-off-by: Patrick Foley <psfoley@gmail.com>

    * Update Adam Optimizer import

    Signed-off-by: Patrick Foley <psfoley@gmail.com>

    ---------

    Signed-off-by: Patrick Foley <psfoley@gmail.com>
    Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
    Co-authored-by: Patrick Foley <psfoley@gmail.com>
    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit d6d896e
Author: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Date:   Fri Jul 14 10:49:08 2023 -0700

    build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_cnn_mnist (securefederatedai#771)

    * build(deps): bump tensorflow in /openfl-workspace/keras_cnn_mnist

    Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
    - [Release notes](https://github.com/tensorflow/tensorflow/releases)
    - [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
    - [Commits](tensorflow/tensorflow@v2.8.4...v2.11.1)

    ---
    updated-dependencies:
    - dependency-name: tensorflow
      dependency-type: direct:production
    ...

    Signed-off-by: dependabot[bot] <support@github.com>

    * revert experimental Adam to legacy (securefederatedai#863)

    Signed-off-by: kta-intel <kevin.ta@intel.com>

    ---------

    Signed-off-by: dependabot[bot] <support@github.com>
    Signed-off-by: kta-intel <kevin.ta@intel.com>
    Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
    Co-authored-by: Kevin Ta <116312994+kta-intel@users.noreply.github.com>
    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit ee05dfb
Author: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Date:   Fri Jul 14 10:48:30 2023 -0700

    build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_nlp (securefederatedai#773)

    * build(deps): bump tensorflow in /openfl-workspace/keras_nlp

    Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
    - [Release notes](https://github.com/tensorflow/tensorflow/releases)
    - [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
    - [Commits](tensorflow/tensorflow@v2.8.4...v2.11.1)

    ---
    updated-dependencies:
    - dependency-name: tensorflow
      dependency-type: direct:production
    ...

    Signed-off-by: dependabot[bot] <support@github.com>

    Signed-off-by: Patrick Foley <psfoley@gmail.com>

    * Update RMSProp optimizer import

    Signed-off-by: Patrick Foley <psfoley@gmail.com>

    * flake8

    Signed-off-by: Patrick Foley <psfoley@gmail.com>

    ---------

    Signed-off-by: Patrick Foley <psfoley@gmail.com>
    Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
    Co-authored-by: Patrick Foley <psfoley@gmail.com>
    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit f45fa04
Author: Francis Storr <francis.storr@intel.com>
Date:   Fri Jul 14 09:50:49 2023 -0700

    Accessibility updates (securefederatedai#861)

    * Fix incorrectly formatted link in docs

    Signed-off-by: Francis Storr <francis.storr@intel.com>

    * Font styling, color contrast, other accessibility updates

    This update:
    1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
    2. Adds colors (in `colors.css`)
    3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

    Closes securefederatedai#848

    Signed-off-by: Francis Storr <francis.storr@intel.com>

    ---------

    Signed-off-by: Francis Storr <francis.storr@intel.com>
    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 966840b
Author: ParthM-GitHub <parthx.mandaliya@intel.com>
Date:   Mon Jul 17 20:32:32 2023 +0530

    Add files via upload

    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

commit 2ada448
Author: Parth Mandaliya <parthx.mandaliya@intel.com>
Date:   Mon Jul 17 13:30:35 2023 +0530

    Modified subset of collaborators testcase.

    Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
    Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
ParthMandaliya pushed a commit to ParthMandaliya/openfl that referenced this issue Oct 4, 2023
* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes securefederatedai#848

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
ParthMandaliya pushed a commit to ParthMandaliya/openfl that referenced this issue Oct 4, 2023
* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes securefederatedai#848

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Color contrast updates for accessibility

Color contrast updates for accessibility
- update generic `a` element
- update color of links in the toggle-able read-the-docs panel
- update the color of the text in search results
- update the color of notes headers

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
ParthMandaliya pushed a commit to ParthMandaliya/openfl that referenced this issue Oct 4, 2023
* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes securefederatedai#848

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
ParthMandaliya pushed a commit to ParthMandaliya/openfl that referenced this issue Oct 5, 2023
* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes securefederatedai#848

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
ParthMandaliya pushed a commit to ParthMandaliya/openfl that referenced this issue Oct 5, 2023
* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes securefederatedai#848

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Color contrast updates for accessibility

Color contrast updates for accessibility
- update generic `a` element
- update color of links in the toggle-able read-the-docs panel
- update the color of the text in search results
- update the color of notes headers

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
ParthMandaliya pushed a commit to ParthMandaliya/openfl that referenced this issue Oct 5, 2023
* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes securefederatedai#848

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
ParthMandaliya pushed a commit to ParthMandaliya/openfl that referenced this issue Oct 5, 2023
* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes securefederatedai#848

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Color contrast updates for accessibility

Color contrast updates for accessibility
- update generic `a` element
- update color of links in the toggle-able read-the-docs panel
- update the color of the text in search results
- update the color of notes headers

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
ParthMandaliya pushed a commit to ParthMandaliya/openfl that referenced this issue Oct 5, 2023
* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes securefederatedai#848

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
psfoley pushed a commit to psfoley/openfl that referenced this issue Oct 18, 2023
* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes securefederatedai#848

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
psfoley pushed a commit to psfoley/openfl that referenced this issue Oct 18, 2023
* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes securefederatedai#848

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Color contrast updates for accessibility

Color contrast updates for accessibility
- update generic `a` element
- update color of links in the toggle-able read-the-docs panel
- update the color of the text in search results
- update the color of notes headers

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
psfoley added a commit that referenced this issue Feb 15, 2024
* Fix flake8 error in local runtime (#764)

* Removes unnecessary dict comprehension

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Removes unnecessary dict comprehension

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update ROADMAP.md (#765)

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update README.md

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update GOVERNANCE.md

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update ROADMAP.md (#785)

Typos

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Updated integrations to GaNDLF (#781)

* renaming loader and runner

Signed-off-by: sarthakpati <sarthak.pati@hotmail.com>

* updated plan to pick the new names

Signed-off-by: sarthakpati <sarthak.pati@hotmail.com>

* new key name

Signed-off-by: sarthakpati <sarthak.pati@hotmail.com>

* allow the ability to pass a file to `gandlf_config_dict` in addition to fully-fledged parameters

Signed-off-by: sarthakpati <sarthak.pati@hotmail.com>

* checking this differently

Signed-off-by: sarthakpati <sarthak.pati@hotmail.com>

* rename variable for clarity

Signed-off-by: sarthakpati <sarthak.pati@hotmail.com>

---------

Signed-off-by: sarthakpati <sarthak.pati@hotmail.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update README.md

Removed references to Intel's ownship, given it's now owned by the LF AI and Data.

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fix Flake8 C419 for Ubuntu CI (#800)

C419 Unnecessary list comprehension passed to any()/all() prevents short-circuiting - rewrite as a generator

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Introduced shard descriptor based collaborator private attributes

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Adding batch size for train, and test in config.yaml file
Files modified:
1. config.yaml
2. mnist_shard_descriptor.py
3. Workflow_Interface_101_MNIST.ipynb
4. participants.py

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Introducing multiple config yaml files

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Removing unnecessary config.yaml file.

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added collaborator private atribute delayed initialization
for local_runtime

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Incorporated review comments

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added multi-pricessing ray backend support and, aggregator yaml file

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Updated multi-processing code

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* RayExecutor class moved from participants.py to localruntime.py

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* RayExecytor moved from interface/pariticipants.py to
runtime/local_runtime.py

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added Aggregator private attribute initialation in runtime

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Removed unnecessary import statements

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Code cleaned up, validated checkpoints manually

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Refactored, and added some new doc string

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolved Flake8 instructions

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Recusrsion removal + Serialization removal integrated

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Incoporated Review Comments

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Removed configuration YAML files, and
added functionality to initialize private attributes by calling a
callback function created by end-user

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Removed commented code

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Implemented new approach, two example files given
1. Workflow_Interface_101_MNIST.py
2. Workflow_Interface_301_MNIST_Watermarking.py

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Internal Review Comments Incorporated

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* No private attributes are required

If private attributes are not provided, by default take an empty dictionary no need to pass a callable function.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update participants.py

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added a check for GPU Resource Allocation

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified error message for resource allocation

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolved bug found during testing phase

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modifide all the test cases, and following tutorials
1. Privacy Meter
2. FedProx

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added following test cases:
1. Workflow_Interface_101_MNIST.ipynb
2. Workflow_Interface_102_Aggregator_Validation.ipynb
3. Workflow_Interface_301_MNIST_Watermarking.ipynb
4. Workflow_Interface_201_Exclusive_GPUs_with_Ray.ipynb
5. Workflow_Interface_103_Cyclic_Institutional_Incremental_Learning.ipynb

Signed-off-by: Parth Mandaliya <Parthx.Mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified and Added Global_DP tutorials.

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified and Added tutorial Workflow-Interface_201_Exclusive_GPUs_with_Ray.ipynb

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified documentation for Workflow_Interface_201 tutorial.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* fixed flake-8 errors

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* reverted import module code

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolved merge conflicts in local_runtime.py
---------
Fix flake8 error in local runtime (#764)

* Removes unnecessary dict comprehension

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Removes unnecessary dict comprehension

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
---------

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update README.md

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fix warnings and issues in docs (#825)

* Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

* fixup! Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

---------

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Add Logo (#827)

* Add Logo

* Update README.md

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Change OpenFL documentation font to improve accessibility (#809)

This replaces the font of OpenFL documents with Intel One Mono font for low vision developers.

    Known issues:
    1. The text font within the images has not been changed.
    2. Some icons that do not exist in the new font cannot be displayed properly.

    Fixes securefederatedai#799

    Co-authored-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: He, Dan H <dan.h.he@intel.com>
    Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Co-authored-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update unit tests to improve code coverage (#821)

* Update ci config

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add unit test for following files

- openfl/federated/plan/plan.py
- openfl/interface/aggregation_functions/core/adaptive_aggregation.py

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add some test cases for databases module

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Fix bugs for databases module unittest

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Update unit tests for component module

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Restore workflow config and update some comments

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Enable save_ test case.
Add yaml under test dir for unit test usage.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove plan to new dir.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove plan to new dir.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add aggregator start test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 2 aggregator test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 1 aggregator test case.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Format code.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Refactor code.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add collaborator start test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 1 collaborator test case.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Format with flake8

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove TODO comments

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

---------

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>
Co-authored-by: Wang, Wenjie <wenjie2.wang@intel.com>
Co-authored-by: Lei5 Chen <lei5.chen@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Add PyTorch linear regression example (#808)

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster.

    The model is defined by Pytorch which is able to run over both cpu (by default) and gpu. The dataset is generated by make_regression from sklearn.datasets with pre-defined parameters.

    Fixes #797

    Co-authored-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: He, Dan H <dan.h.he@intel.com>
    Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* This prints out the hash of the CSR to disk for both the aggregator and (#813)

* This prints out the hash of the CSR to disk for both the aggregator and
collaborator. The user then compares and approves this hash with the
hash printed out of the file to validate the CSR. In addition, a warning
message is pritned if certify is run in silent mode.

Fixes securefederatedai#692

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Refactor read_csr function to use get_csr_hash

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Ask to check hashes before prompt

---------

Signed-off-by: Grant Baker <grant.baker@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Improve workspace requirements import (#810)

Remove the dump_requirement_file operation in export_ method.

            Fixes securefederatedai#767

            Co-authored-by: Li, Qingqing <qingqing.li@intel.com>
            Co-authored-by: Wu, Caili <caili.wu@intel.com>
            Signed-off-by: He, Dan H <dan.h.he@intel.com>
            Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
            Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
            Signed-off-by: Wang, Le <le3.wang@intel.com>
            Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Issue 506 Added Example using FedProx (#818)

* created new ineractive_api dir to hold pytorch fedprox mnist example

corrected files

changed to FedProxOptimizer and ran set_old_weights for new FedProx Pytorch example

renamed FedProx notebook

used mode.parrameters() to get pytorch model weights

got weights using state_dict

changed old wieghts to list (for serialization) and fixed README

input wieghts before zero_grad

[Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: #506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* [Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: securefederatedai#506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* Update README.md

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* addressed comments by psfoley: corrected words in the jupyter notebook metadata and added a link to the FedProx paper in the README.

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* [Bug: 768] FX CLI: Separate create, cert gen commands (#807)

This change separates existing command
"fx collaborator.py generate-cert-request" command into two
commands.
"fx collaborator create -n {NAME} -d {DATA_PATH: optional}".
"fx collaborator generate-cert-request -n {NAME}".

Fixes #768

Signed-off-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Co-authored-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Add new tutorial example to OpenFL interactive API (#812)

* Add new tutorial example to OpenFL interactive API

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster

The model is defined by scikit-learn which is able to run over both cpu (by default) and gpu. The dataset is 1-dimensional noisy data of sinusoid with pre-defined parameters.

Fixes #798

Co-authored-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>

Signed-off-by: Yi CAO <yi2.cao@intel.com>

* reduced requirements.txt in workspace

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow in /openfl-workspace/tf_cnn_histology (#776)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow (#777)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Running a federation with GaNDLF Documentation (#794)

* Initial commit of Running the federation with GaNDLF Documentation

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update README.md

Removed references to Intel's ownship, given it's now owned by the LF AI and Data.

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix Flake8 C419 for Ubuntu CI (#800)

C419 Unnecessary list comprehension passed to any()/all() prevents short-circuiting - rewrite as a generator

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update README.md

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix warnings and issues in docs (#825)

* Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

* fixup! Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

---------

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add Logo (#827)

* Add Logo

* Update README.md

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Change OpenFL documentation font to improve accessibility (#809)

This replaces the font of OpenFL documents with Intel One Mono font for low vision developers.

    Known issues:
    1. The text font within the images has not been changed.
    2. Some icons that do not exist in the new font cannot be displayed properly.

    Fixes securefederatedai#799

    Co-authored-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: He, Dan H <dan.h.he@intel.com>
    Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Co-authored-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update unit tests to improve code coverage (#821)

* Update ci config

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add unit test for following files

- openfl/federated/plan/plan.py
- openfl/interface/aggregation_functions/core/adaptive_aggregation.py

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add some test cases for databases module

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Fix bugs for databases module unittest

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Update unit tests for component module

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Restore workflow config and update some comments

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Enable save_ test case.
Add yaml under test dir for unit test usage.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove plan to new dir.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove plan to new dir.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add aggregator start test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 2 aggregator test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 1 aggregator test case.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Format code.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Refactor code.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add collaborator start test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 1 collaborator test case.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Format with flake8

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove TODO comments

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

---------

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>
Co-authored-by: Wang, Wenjie <wenjie2.wang@intel.com>
Co-authored-by: Lei5 Chen <lei5.chen@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add PyTorch linear regression example (#808)

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster.

    The model is defined by Pytorch which is able to run over both cpu (by default) and gpu. The dataset is generated by make_regression from sklearn.datasets with pre-defined parameters.

    Fixes #797

    Co-authored-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: He, Dan H <dan.h.he@intel.com>
    Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* This prints out the hash of the CSR to disk for both the aggregator and (#813)

* This prints out the hash of the CSR to disk for both the aggregator and
collaborator. The user then compares and approves this hash with the
hash printed out of the file to validate the CSR. In addition, a warning
message is pritned if certify is run in silent mode.

Fixes securefederatedai#692

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Refactor read_csr function to use get_csr_hash

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Ask to check hashes before prompt

---------

Signed-off-by: Grant Baker <grant.baker@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Improve workspace requirements import (#810)

Remove the dump_requirement_file operation in export_ method.

            Fixes securefederatedai#767

            Co-authored-by: Li, Qingqing <qingqing.li@intel.com>
            Co-authored-by: Wu, Caili <caili.wu@intel.com>
            Signed-off-by: He, Dan H <dan.h.he@intel.com>
            Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
            Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
            Signed-off-by: Wang, Le <le3.wang@intel.com>
            Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Issue 506 Added Example using FedProx (#818)

* created new ineractive_api dir to hold pytorch fedprox mnist example

corrected files

changed to FedProxOptimizer and ran set_old_weights for new FedProx Pytorch example

renamed FedProx notebook

used mode.parrameters() to get pytorch model weights

got weights using state_dict

changed old wieghts to list (for serialization) and fixed README

input wieghts before zero_grad

[Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: #506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* [Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: securefederatedai#506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* Update README.md

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* addressed comments by psfoley: corrected words in the jupyter notebook metadata and added a link to the FedProx paper in the README.

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* [Bug: 768] FX CLI: Separate create, cert gen commands (#807)

This change separates existing command
"fx collaborator.py generate-cert-request" command into two
commands.
"fx collaborator create -n {NAME} -d {DATA_PATH: optional}".
"fx collaborator generate-cert-request -n {NAME}".

Fixes #768

Signed-off-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Co-authored-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add new tutorial example to OpenFL interactive API (#812)

* Add new tutorial example to OpenFL interactive API

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster

The model is defined by scikit-learn which is able to run over both cpu (by default) and gpu. The dataset is 1-dimensional noisy data of sinusoid with pre-defined parameters.

Fixes #798

Co-authored-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>

Signed-off-by: Yi CAO <yi2.cao@intel.com>

* reduced requirements.txt in workspace

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* build(deps): bump tensorflow in /openfl-workspace/tf_cnn_histology (#776)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* build(deps): bump tensorflow (#777)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update GaNDLF repo location and test CI with master branch

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update GaNDLF repo location and test CI with master branch

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update GaNDLF repo location and test CI with master branch

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix documentation links. Change path names and templates for CI

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix paths

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix paths

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix breaking tests

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add compatible onnx version to requirements.txt file

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong csv file name

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong csv file name

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong names in workflow file

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong data path

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix lint in test_gandlf.py

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix lint errors

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>
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Signed-off-by: Yi CAO <yi2.cao@intel.com>
Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
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Co-authored-by: akantak <aleksander.kantak@intel.com>
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Co-authored-by: He, Dan H <dan.h.he@intel.com>
Co-authored-by: xiaoranf <desolatefang@gmail.com>
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Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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* Fixed GaNDLF rst issues. Add sphinxcontrib-mermaid (#841)

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fix GaNDLF documentation links (#842)

* Fixed GaNDLF rst issues. Add sphinxcontrib-mermaid

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix links in GaNDLF Documentation

* Fixed GaNDLF rst issues. Add sphinxcontrib-mermaid

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix links in GaNDLF Documentation

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fix incorrectly formatted link in docs (#839)

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolving merge conflicts in local-runtime.py

Integrated aggregator as stateful actor branch, tested.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

--------
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump onnx in /openfl-workspace/gandlf_seg_test (#840)

Bumps [onnx](https://github.com/onnx/onnx) from 1.12 to 1.13.0.
- [Release notes](https://github.com/onnx/onnx/releases)
- [Changelog](https://github.com/onnx/onnx/blob/main/docs/Changelog.md)
- [Commits](https://github.com/onnx/onnx/compare/v1.12.0...v1.13.0)

---
updated-dependencies:
- dependency-name: onnx
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Merged changes of remove-torch-dependency branch

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update setup.py

Upgrading protobuf to 3.20.3 as per tensorboard requirement

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolving merge conflicts

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Accessibility updates (#861)

* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes #848

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_nlp (#773)

* build(deps): bump tensorflow in /openfl-workspace/keras_nlp

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update RMSProp optimizer import

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* flake8

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Patrick Foley <psfoley@gmail.com>
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* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_cnn_mnist (#771)

* build(deps): bump tensorflow in /openfl-workspace/keras_cnn_mnist

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>

* revert experimental Adam to legacy (#863)

Signed-off-by: kta-intel <kevin.ta@intel.com>

---------

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Signed-off-by: kta-intel <kevin.ta@intel.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Kevin Ta <116312994+kta-intel@users.noreply.github.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_cnn_with_compression (#770)

* build(deps): bump tensorflow

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update Adam Optimizer import

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
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* build(deps): bump tensorflow from 2.9.3 to 2.11.1 in /openfl-tutorials/interactive_api/Flax_CNN_CIFAR (#775)

* build(deps): bump tensorflow

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>

* Fixed breaking backages

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add quiet flag back to pip install

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: dependabot[bot] <support@github.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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* build(deps): bump tensorflow-cpu from 2.8.4 to 2.11.1 in /openfl-workspace/keras_nlp_gramine_ready (#769)

* build(deps): bump tensorflow-cpu

Bumps [tensorflow-cpu](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow-cpu
  dependency-type: direct:production
...

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* Use legacy RMSprop optimizer

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: dependabot[bot] <support@github.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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* Accessibility color contrast fixes (#864)

* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes #848

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Color contrast updates for accessibility

Color contrast updates for accessibility
- update generic `a` element
- update color of links in the toggle-able read-the-docs panel
- update the color of the text in search results
- update the color of notes headers

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Tweak link color so it’s not so aggressive (#865)

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /tests/github/interactive_api_director/experiments/tensorflow_mnist/envoy (#772)

* build(deps): bump tensorflow

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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* Update sd_requirements.txt

* revert to legacy SGD and install tensorflow==2.11 for workflow

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* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/tf_2dunet (#774)

* build(deps): bump tensorflow in /openfl-workspace/tf_2dunet

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
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...

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* Update requirements.txt

to retrigger CI

* Update requirements.txt

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Testflow for verifying stdout redirection to Metaflow datastore (#758)

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nammbash pushed a commit to nammbash/openfl that referenced this issue Feb 27, 2024
* Fix flake8 error in local runtime (#764)

* Removes unnecessary dict comprehension

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* Removes unnecessary dict comprehension

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* Update ROADMAP.md (#765)

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* Update README.md

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* Update GOVERNANCE.md

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* Update ROADMAP.md (#785)

Typos

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* Updated integrations to GaNDLF (#781)

* renaming loader and runner

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* checking this differently

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* rename variable for clarity

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* Update README.md

Removed references to Intel's ownship, given it's now owned by the LF AI and Data.

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* Fix Flake8 C419 for Ubuntu CI (#800)

C419 Unnecessary list comprehension passed to any()/all() prevents short-circuiting - rewrite as a generator

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* Introduced shard descriptor based collaborator private attributes

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* Adding batch size for train, and test in config.yaml file
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3. Workflow_Interface_101_MNIST.ipynb
4. participants.py

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* Removing unnecessary config.yaml file.

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Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Recusrsion removal + Serialization removal integrated

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Incoporated Review Comments

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Removed configuration YAML files, and
added functionality to initialize private attributes by calling a
callback function created by end-user

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Removed commented code

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Implemented new approach, two example files given
1. Workflow_Interface_101_MNIST.py
2. Workflow_Interface_301_MNIST_Watermarking.py

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Internal Review Comments Incorporated

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* No private attributes are required

If private attributes are not provided, by default take an empty dictionary no need to pass a callable function.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update participants.py

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added a check for GPU Resource Allocation

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified error message for resource allocation

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolved bug found during testing phase

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modifide all the test cases, and following tutorials
1. Privacy Meter
2. FedProx

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added following test cases:
1. Workflow_Interface_101_MNIST.ipynb
2. Workflow_Interface_102_Aggregator_Validation.ipynb
3. Workflow_Interface_301_MNIST_Watermarking.ipynb
4. Workflow_Interface_201_Exclusive_GPUs_with_Ray.ipynb
5. Workflow_Interface_103_Cyclic_Institutional_Incremental_Learning.ipynb

Signed-off-by: Parth Mandaliya <Parthx.Mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified and Added Global_DP tutorials.

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified and Added tutorial Workflow-Interface_201_Exclusive_GPUs_with_Ray.ipynb

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified documentation for Workflow_Interface_201 tutorial.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* fixed flake-8 errors

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* reverted import module code

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolved merge conflicts in local_runtime.py
---------
Fix flake8 error in local runtime (#764)

* Removes unnecessary dict comprehension

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Removes unnecessary dict comprehension

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
---------

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update README.md

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fix warnings and issues in docs (#825)

* Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

* fixup! Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

---------

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Add Logo (#827)

* Add Logo

* Update README.md

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Change OpenFL documentation font to improve accessibility (#809)

This replaces the font of OpenFL documents with Intel One Mono font for low vision developers.

    Known issues:
    1. The text font within the images has not been changed.
    2. Some icons that do not exist in the new font cannot be displayed properly.

    Fixes securefederatedai#799

    Co-authored-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: He, Dan H <dan.h.he@intel.com>
    Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Co-authored-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update unit tests to improve code coverage (#821)

* Update ci config

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add unit test for following files

- openfl/federated/plan/plan.py
- openfl/interface/aggregation_functions/core/adaptive_aggregation.py

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add some test cases for databases module

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Fix bugs for databases module unittest

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Update unit tests for component module

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Restore workflow config and update some comments

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Enable save_ test case.
Add yaml under test dir for unit test usage.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove plan to new dir.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove plan to new dir.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add aggregator start test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 2 aggregator test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 1 aggregator test case.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Format code.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Refactor code.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add collaborator start test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 1 collaborator test case.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Format with flake8

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove TODO comments

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

---------

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>
Co-authored-by: Wang, Wenjie <wenjie2.wang@intel.com>
Co-authored-by: Lei5 Chen <lei5.chen@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Add PyTorch linear regression example (#808)

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster.

    The model is defined by Pytorch which is able to run over both cpu (by default) and gpu. The dataset is generated by make_regression from sklearn.datasets with pre-defined parameters.

    Fixes #797

    Co-authored-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: He, Dan H <dan.h.he@intel.com>
    Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* This prints out the hash of the CSR to disk for both the aggregator and (#813)

* This prints out the hash of the CSR to disk for both the aggregator and
collaborator. The user then compares and approves this hash with the
hash printed out of the file to validate the CSR. In addition, a warning
message is pritned if certify is run in silent mode.

Fixes securefederatedai#692

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Refactor read_csr function to use get_csr_hash

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Ask to check hashes before prompt

---------

Signed-off-by: Grant Baker <grant.baker@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Improve workspace requirements import (#810)

Remove the dump_requirement_file operation in export_ method.

            Fixes securefederatedai#767

            Co-authored-by: Li, Qingqing <qingqing.li@intel.com>
            Co-authored-by: Wu, Caili <caili.wu@intel.com>
            Signed-off-by: He, Dan H <dan.h.he@intel.com>
            Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
            Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
            Signed-off-by: Wang, Le <le3.wang@intel.com>
            Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Issue 506 Added Example using FedProx (#818)

* created new ineractive_api dir to hold pytorch fedprox mnist example

corrected files

changed to FedProxOptimizer and ran set_old_weights for new FedProx Pytorch example

renamed FedProx notebook

used mode.parrameters() to get pytorch model weights

got weights using state_dict

changed old wieghts to list (for serialization) and fixed README

input wieghts before zero_grad

[Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: #506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* [Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: securefederatedai#506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* Update README.md

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* addressed comments by psfoley: corrected words in the jupyter notebook metadata and added a link to the FedProx paper in the README.

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* [Bug: 768] FX CLI: Separate create, cert gen commands (#807)

This change separates existing command
"fx collaborator.py generate-cert-request" command into two
commands.
"fx collaborator create -n {NAME} -d {DATA_PATH: optional}".
"fx collaborator generate-cert-request -n {NAME}".

Fixes #768

Signed-off-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Co-authored-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Add new tutorial example to OpenFL interactive API (#812)

* Add new tutorial example to OpenFL interactive API

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster

The model is defined by scikit-learn which is able to run over both cpu (by default) and gpu. The dataset is 1-dimensional noisy data of sinusoid with pre-defined parameters.

Fixes #798

Co-authored-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>

Signed-off-by: Yi CAO <yi2.cao@intel.com>

* reduced requirements.txt in workspace

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow in /openfl-workspace/tf_cnn_histology (#776)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow (#777)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Running a federation with GaNDLF Documentation (#794)

* Initial commit of Running the federation with GaNDLF Documentation

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update README.md

Removed references to Intel's ownship, given it's now owned by the LF AI and Data.

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix Flake8 C419 for Ubuntu CI (#800)

C419 Unnecessary list comprehension passed to any()/all() prevents short-circuiting - rewrite as a generator

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update README.md

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix warnings and issues in docs (#825)

* Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

* fixup! Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

---------

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add Logo (#827)

* Add Logo

* Update README.md

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Change OpenFL documentation font to improve accessibility (#809)

This replaces the font of OpenFL documents with Intel One Mono font for low vision developers.

    Known issues:
    1. The text font within the images has not been changed.
    2. Some icons that do not exist in the new font cannot be displayed properly.

    Fixes securefederatedai#799

    Co-authored-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: He, Dan H <dan.h.he@intel.com>
    Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Co-authored-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update unit tests to improve code coverage (#821)

* Update ci config

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add unit test for following files

- openfl/federated/plan/plan.py
- openfl/interface/aggregation_functions/core/adaptive_aggregation.py

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add some test cases for databases module

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Fix bugs for databases module unittest

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Update unit tests for component module

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Restore workflow config and update some comments

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Enable save_ test case.
Add yaml under test dir for unit test usage.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove plan to new dir.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove plan to new dir.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add aggregator start test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 2 aggregator test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 1 aggregator test case.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Format code.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Refactor code.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add collaborator start test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 1 collaborator test case.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Format with flake8

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove TODO comments

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

---------

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>
Co-authored-by: Wang, Wenjie <wenjie2.wang@intel.com>
Co-authored-by: Lei5 Chen <lei5.chen@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add PyTorch linear regression example (#808)

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster.

    The model is defined by Pytorch which is able to run over both cpu (by default) and gpu. The dataset is generated by make_regression from sklearn.datasets with pre-defined parameters.

    Fixes #797

    Co-authored-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: He, Dan H <dan.h.he@intel.com>
    Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* This prints out the hash of the CSR to disk for both the aggregator and (#813)

* This prints out the hash of the CSR to disk for both the aggregator and
collaborator. The user then compares and approves this hash with the
hash printed out of the file to validate the CSR. In addition, a warning
message is pritned if certify is run in silent mode.

Fixes securefederatedai#692

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Refactor read_csr function to use get_csr_hash

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Ask to check hashes before prompt

---------

Signed-off-by: Grant Baker <grant.baker@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Improve workspace requirements import (#810)

Remove the dump_requirement_file operation in export_ method.

            Fixes securefederatedai#767

            Co-authored-by: Li, Qingqing <qingqing.li@intel.com>
            Co-authored-by: Wu, Caili <caili.wu@intel.com>
            Signed-off-by: He, Dan H <dan.h.he@intel.com>
            Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
            Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
            Signed-off-by: Wang, Le <le3.wang@intel.com>
            Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Issue 506 Added Example using FedProx (#818)

* created new ineractive_api dir to hold pytorch fedprox mnist example

corrected files

changed to FedProxOptimizer and ran set_old_weights for new FedProx Pytorch example

renamed FedProx notebook

used mode.parrameters() to get pytorch model weights

got weights using state_dict

changed old wieghts to list (for serialization) and fixed README

input wieghts before zero_grad

[Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: #506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* [Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: securefederatedai#506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* Update README.md

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* addressed comments by psfoley: corrected words in the jupyter notebook metadata and added a link to the FedProx paper in the README.

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* [Bug: 768] FX CLI: Separate create, cert gen commands (#807)

This change separates existing command
"fx collaborator.py generate-cert-request" command into two
commands.
"fx collaborator create -n {NAME} -d {DATA_PATH: optional}".
"fx collaborator generate-cert-request -n {NAME}".

Fixes #768

Signed-off-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Co-authored-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add new tutorial example to OpenFL interactive API (#812)

* Add new tutorial example to OpenFL interactive API

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster

The model is defined by scikit-learn which is able to run over both cpu (by default) and gpu. The dataset is 1-dimensional noisy data of sinusoid with pre-defined parameters.

Fixes #798

Co-authored-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>

Signed-off-by: Yi CAO <yi2.cao@intel.com>

* reduced requirements.txt in workspace

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* build(deps): bump tensorflow in /openfl-workspace/tf_cnn_histology (#776)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* build(deps): bump tensorflow (#777)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
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  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update GaNDLF repo location and test CI with master branch

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update GaNDLF repo location and test CI with master branch

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update GaNDLF repo location and test CI with master branch

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix documentation links. Change path names and templates for CI

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix paths

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix paths

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix breaking tests

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add compatible onnx version to requirements.txt file

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong csv file name

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong csv file name

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong names in workflow file

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong data path

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix lint in test_gandlf.py

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix lint errors

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>
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* Fixed GaNDLF rst issues. Add sphinxcontrib-mermaid (#841)

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fix GaNDLF documentation links (#842)

* Fixed GaNDLF rst issues. Add sphinxcontrib-mermaid

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix links in GaNDLF Documentation

* Fixed GaNDLF rst issues. Add sphinxcontrib-mermaid

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix links in GaNDLF Documentation

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fix incorrectly formatted link in docs (#839)

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolving merge conflicts in local-runtime.py

Integrated aggregator as stateful actor branch, tested.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

--------
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump onnx in /openfl-workspace/gandlf_seg_test (#840)

Bumps [onnx](https://github.com/onnx/onnx) from 1.12 to 1.13.0.
- [Release notes](https://github.com/onnx/onnx/releases)
- [Changelog](https://github.com/onnx/onnx/blob/main/docs/Changelog.md)
- [Commits](https://github.com/onnx/onnx/compare/v1.12.0...v1.13.0)

---
updated-dependencies:
- dependency-name: onnx
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Merged changes of remove-torch-dependency branch

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update setup.py

Upgrading protobuf to 3.20.3 as per tensorboard requirement

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolving merge conflicts

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Accessibility updates (#861)

* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes #848

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_nlp (#773)

* build(deps): bump tensorflow in /openfl-workspace/keras_nlp

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update RMSProp optimizer import

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* flake8

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Patrick Foley <psfoley@gmail.com>
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* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_cnn_mnist (#771)

* build(deps): bump tensorflow in /openfl-workspace/keras_cnn_mnist

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>

* revert experimental Adam to legacy (#863)

Signed-off-by: kta-intel <kevin.ta@intel.com>

---------

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Signed-off-by: kta-intel <kevin.ta@intel.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Kevin Ta <116312994+kta-intel@users.noreply.github.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_cnn_with_compression (#770)

* build(deps): bump tensorflow

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update Adam Optimizer import

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
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* build(deps): bump tensorflow from 2.9.3 to 2.11.1 in /openfl-tutorials/interactive_api/Flax_CNN_CIFAR (#775)

* build(deps): bump tensorflow

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>

* Fixed breaking backages

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add quiet flag back to pip install

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: dependabot[bot] <support@github.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>
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* build(deps): bump tensorflow-cpu from 2.8.4 to 2.11.1 in /openfl-workspace/keras_nlp_gramine_ready (#769)

* build(deps): bump tensorflow-cpu

Bumps [tensorflow-cpu](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
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...

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* Use legacy RMSprop optimizer

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

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Signed-off-by: Patrick Foley <psfoley@gmail.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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* Accessibility color contrast fixes (#864)

* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes #848

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Color contrast updates for accessibility

Color contrast updates for accessibility
- update generic `a` element
- update color of links in the toggle-able read-the-docs panel
- update the color of the text in search results
- update the color of notes headers

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Tweak link color so it’s not so aggressive (#865)

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /tests/github/interactive_api_director/experiments/tensorflow_mnist/envoy (#772)

* build(deps): bump tensorflow

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
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* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/tf_2dunet (#774)

* build(deps): bump tensorflow in /openfl-workspace/tf_2dunet

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
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nammbash pushed a commit to nammbash/openfl that referenced this issue Feb 27, 2024
* Fix flake8 error in local runtime (#764)

* Removes unnecessary dict comprehension

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* Removes unnecessary dict comprehension

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* Update ROADMAP.md (#765)

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* Update ROADMAP.md (#785)

Typos

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* Fix Flake8 C419 for Ubuntu CI (#800)

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* Incoporated Review Comments

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Removed configuration YAML files, and
added functionality to initialize private attributes by calling a
callback function created by end-user

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Removed commented code

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Implemented new approach, two example files given
1. Workflow_Interface_101_MNIST.py
2. Workflow_Interface_301_MNIST_Watermarking.py

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Internal Review Comments Incorporated

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* No private attributes are required

If private attributes are not provided, by default take an empty dictionary no need to pass a callable function.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update participants.py

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added a check for GPU Resource Allocation

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified error message for resource allocation

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolved bug found during testing phase

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modifide all the test cases, and following tutorials
1. Privacy Meter
2. FedProx

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added following test cases:
1. Workflow_Interface_101_MNIST.ipynb
2. Workflow_Interface_102_Aggregator_Validation.ipynb
3. Workflow_Interface_301_MNIST_Watermarking.ipynb
4. Workflow_Interface_201_Exclusive_GPUs_with_Ray.ipynb
5. Workflow_Interface_103_Cyclic_Institutional_Incremental_Learning.ipynb

Signed-off-by: Parth Mandaliya <Parthx.Mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified and Added Global_DP tutorials.

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified and Added tutorial Workflow-Interface_201_Exclusive_GPUs_with_Ray.ipynb

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified documentation for Workflow_Interface_201 tutorial.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* fixed flake-8 errors

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* reverted import module code

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolved merge conflicts in local_runtime.py
---------
Fix flake8 error in local runtime (#764)

* Removes unnecessary dict comprehension

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Removes unnecessary dict comprehension

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
---------

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update README.md

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fix warnings and issues in docs (#825)

* Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

* fixup! Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

---------

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Add Logo (#827)

* Add Logo

* Update README.md

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Change OpenFL documentation font to improve accessibility (#809)

This replaces the font of OpenFL documents with Intel One Mono font for low vision developers.

    Known issues:
    1. The text font within the images has not been changed.
    2. Some icons that do not exist in the new font cannot be displayed properly.

    Fixes securefederatedai#799

    Co-authored-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: He, Dan H <dan.h.he@intel.com>
    Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Co-authored-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update unit tests to improve code coverage (#821)

* Update ci config

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add unit test for following files

- openfl/federated/plan/plan.py
- openfl/interface/aggregation_functions/core/adaptive_aggregation.py

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add some test cases for databases module

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Fix bugs for databases module unittest

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Update unit tests for component module

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Restore workflow config and update some comments

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Enable save_ test case.
Add yaml under test dir for unit test usage.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove plan to new dir.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove plan to new dir.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add aggregator start test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 2 aggregator test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 1 aggregator test case.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Format code.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Refactor code.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add collaborator start test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 1 collaborator test case.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Format with flake8

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove TODO comments

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

---------

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>
Co-authored-by: Wang, Wenjie <wenjie2.wang@intel.com>
Co-authored-by: Lei5 Chen <lei5.chen@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Add PyTorch linear regression example (#808)

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster.

    The model is defined by Pytorch which is able to run over both cpu (by default) and gpu. The dataset is generated by make_regression from sklearn.datasets with pre-defined parameters.

    Fixes #797

    Co-authored-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: He, Dan H <dan.h.he@intel.com>
    Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* This prints out the hash of the CSR to disk for both the aggregator and (#813)

* This prints out the hash of the CSR to disk for both the aggregator and
collaborator. The user then compares and approves this hash with the
hash printed out of the file to validate the CSR. In addition, a warning
message is pritned if certify is run in silent mode.

Fixes securefederatedai#692

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Refactor read_csr function to use get_csr_hash

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Ask to check hashes before prompt

---------

Signed-off-by: Grant Baker <grant.baker@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Improve workspace requirements import (#810)

Remove the dump_requirement_file operation in export_ method.

            Fixes securefederatedai#767

            Co-authored-by: Li, Qingqing <qingqing.li@intel.com>
            Co-authored-by: Wu, Caili <caili.wu@intel.com>
            Signed-off-by: He, Dan H <dan.h.he@intel.com>
            Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
            Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
            Signed-off-by: Wang, Le <le3.wang@intel.com>
            Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Issue 506 Added Example using FedProx (#818)

* created new ineractive_api dir to hold pytorch fedprox mnist example

corrected files

changed to FedProxOptimizer and ran set_old_weights for new FedProx Pytorch example

renamed FedProx notebook

used mode.parrameters() to get pytorch model weights

got weights using state_dict

changed old wieghts to list (for serialization) and fixed README

input wieghts before zero_grad

[Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: #506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* [Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: securefederatedai#506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* Update README.md

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* addressed comments by psfoley: corrected words in the jupyter notebook metadata and added a link to the FedProx paper in the README.

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* [Bug: 768] FX CLI: Separate create, cert gen commands (#807)

This change separates existing command
"fx collaborator.py generate-cert-request" command into two
commands.
"fx collaborator create -n {NAME} -d {DATA_PATH: optional}".
"fx collaborator generate-cert-request -n {NAME}".

Fixes #768

Signed-off-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Co-authored-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Add new tutorial example to OpenFL interactive API (#812)

* Add new tutorial example to OpenFL interactive API

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster

The model is defined by scikit-learn which is able to run over both cpu (by default) and gpu. The dataset is 1-dimensional noisy data of sinusoid with pre-defined parameters.

Fixes #798

Co-authored-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>

Signed-off-by: Yi CAO <yi2.cao@intel.com>

* reduced requirements.txt in workspace

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow in /openfl-workspace/tf_cnn_histology (#776)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow (#777)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Running a federation with GaNDLF Documentation (#794)

* Initial commit of Running the federation with GaNDLF Documentation

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update README.md

Removed references to Intel's ownship, given it's now owned by the LF AI and Data.

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix Flake8 C419 for Ubuntu CI (#800)

C419 Unnecessary list comprehension passed to any()/all() prevents short-circuiting - rewrite as a generator

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update README.md

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix warnings and issues in docs (#825)

* Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

* fixup! Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

---------

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add Logo (#827)

* Add Logo

* Update README.md

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Change OpenFL documentation font to improve accessibility (#809)

This replaces the font of OpenFL documents with Intel One Mono font for low vision developers.

    Known issues:
    1. The text font within the images has not been changed.
    2. Some icons that do not exist in the new font cannot be displayed properly.

    Fixes securefederatedai#799

    Co-authored-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: He, Dan H <dan.h.he@intel.com>
    Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Co-authored-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update unit tests to improve code coverage (#821)

* Update ci config

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add unit test for following files

- openfl/federated/plan/plan.py
- openfl/interface/aggregation_functions/core/adaptive_aggregation.py

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add some test cases for databases module

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Fix bugs for databases module unittest

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Update unit tests for component module

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Restore workflow config and update some comments

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Enable save_ test case.
Add yaml under test dir for unit test usage.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove plan to new dir.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove plan to new dir.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add aggregator start test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 2 aggregator test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 1 aggregator test case.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Format code.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Refactor code.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add collaborator start test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 1 collaborator test case.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Format with flake8

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove TODO comments

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

---------

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>
Co-authored-by: Wang, Wenjie <wenjie2.wang@intel.com>
Co-authored-by: Lei5 Chen <lei5.chen@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add PyTorch linear regression example (#808)

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster.

    The model is defined by Pytorch which is able to run over both cpu (by default) and gpu. The dataset is generated by make_regression from sklearn.datasets with pre-defined parameters.

    Fixes #797

    Co-authored-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: He, Dan H <dan.h.he@intel.com>
    Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* This prints out the hash of the CSR to disk for both the aggregator and (#813)

* This prints out the hash of the CSR to disk for both the aggregator and
collaborator. The user then compares and approves this hash with the
hash printed out of the file to validate the CSR. In addition, a warning
message is pritned if certify is run in silent mode.

Fixes securefederatedai#692

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Refactor read_csr function to use get_csr_hash

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Ask to check hashes before prompt

---------

Signed-off-by: Grant Baker <grant.baker@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Improve workspace requirements import (#810)

Remove the dump_requirement_file operation in export_ method.

            Fixes securefederatedai#767

            Co-authored-by: Li, Qingqing <qingqing.li@intel.com>
            Co-authored-by: Wu, Caili <caili.wu@intel.com>
            Signed-off-by: He, Dan H <dan.h.he@intel.com>
            Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
            Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
            Signed-off-by: Wang, Le <le3.wang@intel.com>
            Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Issue 506 Added Example using FedProx (#818)

* created new ineractive_api dir to hold pytorch fedprox mnist example

corrected files

changed to FedProxOptimizer and ran set_old_weights for new FedProx Pytorch example

renamed FedProx notebook

used mode.parrameters() to get pytorch model weights

got weights using state_dict

changed old wieghts to list (for serialization) and fixed README

input wieghts before zero_grad

[Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: #506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* [Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: securefederatedai#506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* Update README.md

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* addressed comments by psfoley: corrected words in the jupyter notebook metadata and added a link to the FedProx paper in the README.

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* [Bug: 768] FX CLI: Separate create, cert gen commands (#807)

This change separates existing command
"fx collaborator.py generate-cert-request" command into two
commands.
"fx collaborator create -n {NAME} -d {DATA_PATH: optional}".
"fx collaborator generate-cert-request -n {NAME}".

Fixes #768

Signed-off-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Co-authored-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add new tutorial example to OpenFL interactive API (#812)

* Add new tutorial example to OpenFL interactive API

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster

The model is defined by scikit-learn which is able to run over both cpu (by default) and gpu. The dataset is 1-dimensional noisy data of sinusoid with pre-defined parameters.

Fixes #798

Co-authored-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>

Signed-off-by: Yi CAO <yi2.cao@intel.com>

* reduced requirements.txt in workspace

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* build(deps): bump tensorflow in /openfl-workspace/tf_cnn_histology (#776)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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* build(deps): bump tensorflow (#777)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update GaNDLF repo location and test CI with master branch

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update GaNDLF repo location and test CI with master branch

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update GaNDLF repo location and test CI with master branch

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix documentation links. Change path names and templates for CI

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix paths

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix paths

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix breaking tests

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add compatible onnx version to requirements.txt file

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong csv file name

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong csv file name

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong names in workflow file

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong data path

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix lint in test_gandlf.py

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix lint errors

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>
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Signed-off-by: Yi CAO <yi2.cao@intel.com>
Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
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Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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* Fixed GaNDLF rst issues. Add sphinxcontrib-mermaid (#841)

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fix GaNDLF documentation links (#842)

* Fixed GaNDLF rst issues. Add sphinxcontrib-mermaid

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix links in GaNDLF Documentation

* Fixed GaNDLF rst issues. Add sphinxcontrib-mermaid

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix links in GaNDLF Documentation

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fix incorrectly formatted link in docs (#839)

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolving merge conflicts in local-runtime.py

Integrated aggregator as stateful actor branch, tested.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

--------
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump onnx in /openfl-workspace/gandlf_seg_test (#840)

Bumps [onnx](https://github.com/onnx/onnx) from 1.12 to 1.13.0.
- [Release notes](https://github.com/onnx/onnx/releases)
- [Changelog](https://github.com/onnx/onnx/blob/main/docs/Changelog.md)
- [Commits](https://github.com/onnx/onnx/compare/v1.12.0...v1.13.0)

---
updated-dependencies:
- dependency-name: onnx
  dependency-type: direct:production
...

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* Merged changes of remove-torch-dependency branch

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update setup.py

Upgrading protobuf to 3.20.3 as per tensorboard requirement

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolving merge conflicts

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Accessibility updates (#861)

* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes #848

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_nlp (#773)

* build(deps): bump tensorflow in /openfl-workspace/keras_nlp

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update RMSProp optimizer import

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* flake8

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Patrick Foley <psfoley@gmail.com>
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* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_cnn_mnist (#771)

* build(deps): bump tensorflow in /openfl-workspace/keras_cnn_mnist

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>

* revert experimental Adam to legacy (#863)

Signed-off-by: kta-intel <kevin.ta@intel.com>

---------

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Signed-off-by: kta-intel <kevin.ta@intel.com>
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Co-authored-by: Kevin Ta <116312994+kta-intel@users.noreply.github.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_cnn_with_compression (#770)

* build(deps): bump tensorflow

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update Adam Optimizer import

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
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* build(deps): bump tensorflow from 2.9.3 to 2.11.1 in /openfl-tutorials/interactive_api/Flax_CNN_CIFAR (#775)

* build(deps): bump tensorflow

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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* Fixed breaking backages

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add quiet flag back to pip install

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

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* build(deps): bump tensorflow-cpu from 2.8.4 to 2.11.1 in /openfl-workspace/keras_nlp_gramine_ready (#769)

* build(deps): bump tensorflow-cpu

Bumps [tensorflow-cpu](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
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- dependency-name: tensorflow-cpu
  dependency-type: direct:production
...

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* Use legacy RMSprop optimizer

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

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Signed-off-by: Patrick Foley <psfoley@gmail.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Accessibility color contrast fixes (#864)

* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes #848

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Color contrast updates for accessibility

Color contrast updates for accessibility
- update generic `a` element
- update color of links in the toggle-able read-the-docs panel
- update the color of the text in search results
- update the color of notes headers

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Tweak link color so it’s not so aggressive (#865)

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /tests/github/interactive_api_director/experiments/tensorflow_mnist/envoy (#772)

* build(deps): bump tensorflow

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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* Update sd_requirements.txt

* revert to legacy SGD and install tensorflow==2.11 for workflow

Signed-off-by: kta-intel <kevin.ta@intel.com>

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* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/tf_2dunet (#774)

* build(deps): bump tensorflow in /openfl-workspace/tf_2dunet

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
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nammbash pushed a commit to nammbash/openfl that referenced this issue Feb 29, 2024
* Fix flake8 error in local runtime (#764)

* Removes unnecessary dict comprehension

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* Removes unnecessary dict comprehension

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* Update ROADMAP.md (#765)

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* Update ROADMAP.md (#785)

Typos

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* Incoporated Review Comments

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callback function created by end-user

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Removed commented code

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Implemented new approach, two example files given
1. Workflow_Interface_101_MNIST.py
2. Workflow_Interface_301_MNIST_Watermarking.py

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Internal Review Comments Incorporated

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* No private attributes are required

If private attributes are not provided, by default take an empty dictionary no need to pass a callable function.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update participants.py

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added a check for GPU Resource Allocation

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified error message for resource allocation

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolved bug found during testing phase

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modifide all the test cases, and following tutorials
1. Privacy Meter
2. FedProx

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added following test cases:
1. Workflow_Interface_101_MNIST.ipynb
2. Workflow_Interface_102_Aggregator_Validation.ipynb
3. Workflow_Interface_301_MNIST_Watermarking.ipynb
4. Workflow_Interface_201_Exclusive_GPUs_with_Ray.ipynb
5. Workflow_Interface_103_Cyclic_Institutional_Incremental_Learning.ipynb

Signed-off-by: Parth Mandaliya <Parthx.Mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified and Added Global_DP tutorials.

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified and Added tutorial Workflow-Interface_201_Exclusive_GPUs_with_Ray.ipynb

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified documentation for Workflow_Interface_201 tutorial.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* fixed flake-8 errors

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* reverted import module code

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolved merge conflicts in local_runtime.py
---------
Fix flake8 error in local runtime (#764)

* Removes unnecessary dict comprehension

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Removes unnecessary dict comprehension

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
---------

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update README.md

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fix warnings and issues in docs (#825)

* Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

* fixup! Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

---------

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Add Logo (#827)

* Add Logo

* Update README.md

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Change OpenFL documentation font to improve accessibility (#809)

This replaces the font of OpenFL documents with Intel One Mono font for low vision developers.

    Known issues:
    1. The text font within the images has not been changed.
    2. Some icons that do not exist in the new font cannot be displayed properly.

    Fixes securefederatedai#799

    Co-authored-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: He, Dan H <dan.h.he@intel.com>
    Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Co-authored-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update unit tests to improve code coverage (#821)

* Update ci config

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add unit test for following files

- openfl/federated/plan/plan.py
- openfl/interface/aggregation_functions/core/adaptive_aggregation.py

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add some test cases for databases module

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Fix bugs for databases module unittest

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Update unit tests for component module

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Restore workflow config and update some comments

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Enable save_ test case.
Add yaml under test dir for unit test usage.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove plan to new dir.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove plan to new dir.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add aggregator start test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 2 aggregator test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 1 aggregator test case.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Format code.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Refactor code.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add collaborator start test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 1 collaborator test case.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Format with flake8

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove TODO comments

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

---------

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>
Co-authored-by: Wang, Wenjie <wenjie2.wang@intel.com>
Co-authored-by: Lei5 Chen <lei5.chen@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Add PyTorch linear regression example (#808)

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster.

    The model is defined by Pytorch which is able to run over both cpu (by default) and gpu. The dataset is generated by make_regression from sklearn.datasets with pre-defined parameters.

    Fixes #797

    Co-authored-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: He, Dan H <dan.h.he@intel.com>
    Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* This prints out the hash of the CSR to disk for both the aggregator and (#813)

* This prints out the hash of the CSR to disk for both the aggregator and
collaborator. The user then compares and approves this hash with the
hash printed out of the file to validate the CSR. In addition, a warning
message is pritned if certify is run in silent mode.

Fixes securefederatedai#692

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Refactor read_csr function to use get_csr_hash

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Ask to check hashes before prompt

---------

Signed-off-by: Grant Baker <grant.baker@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Improve workspace requirements import (#810)

Remove the dump_requirement_file operation in export_ method.

            Fixes securefederatedai#767

            Co-authored-by: Li, Qingqing <qingqing.li@intel.com>
            Co-authored-by: Wu, Caili <caili.wu@intel.com>
            Signed-off-by: He, Dan H <dan.h.he@intel.com>
            Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
            Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
            Signed-off-by: Wang, Le <le3.wang@intel.com>
            Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Issue 506 Added Example using FedProx (#818)

* created new ineractive_api dir to hold pytorch fedprox mnist example

corrected files

changed to FedProxOptimizer and ran set_old_weights for new FedProx Pytorch example

renamed FedProx notebook

used mode.parrameters() to get pytorch model weights

got weights using state_dict

changed old wieghts to list (for serialization) and fixed README

input wieghts before zero_grad

[Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: #506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* [Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: securefederatedai#506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* Update README.md

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* addressed comments by psfoley: corrected words in the jupyter notebook metadata and added a link to the FedProx paper in the README.

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* [Bug: 768] FX CLI: Separate create, cert gen commands (#807)

This change separates existing command
"fx collaborator.py generate-cert-request" command into two
commands.
"fx collaborator create -n {NAME} -d {DATA_PATH: optional}".
"fx collaborator generate-cert-request -n {NAME}".

Fixes #768

Signed-off-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Co-authored-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Add new tutorial example to OpenFL interactive API (#812)

* Add new tutorial example to OpenFL interactive API

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster

The model is defined by scikit-learn which is able to run over both cpu (by default) and gpu. The dataset is 1-dimensional noisy data of sinusoid with pre-defined parameters.

Fixes #798

Co-authored-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>

Signed-off-by: Yi CAO <yi2.cao@intel.com>

* reduced requirements.txt in workspace

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow in /openfl-workspace/tf_cnn_histology (#776)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow (#777)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Running a federation with GaNDLF Documentation (#794)

* Initial commit of Running the federation with GaNDLF Documentation

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update README.md

Removed references to Intel's ownship, given it's now owned by the LF AI and Data.

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix Flake8 C419 for Ubuntu CI (#800)

C419 Unnecessary list comprehension passed to any()/all() prevents short-circuiting - rewrite as a generator

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update README.md

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix warnings and issues in docs (#825)

* Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

* fixup! Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

---------

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add Logo (#827)

* Add Logo

* Update README.md

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Change OpenFL documentation font to improve accessibility (#809)

This replaces the font of OpenFL documents with Intel One Mono font for low vision developers.

    Known issues:
    1. The text font within the images has not been changed.
    2. Some icons that do not exist in the new font cannot be displayed properly.

    Fixes securefederatedai#799

    Co-authored-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: He, Dan H <dan.h.he@intel.com>
    Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Co-authored-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update unit tests to improve code coverage (#821)

* Update ci config

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add unit test for following files

- openfl/federated/plan/plan.py
- openfl/interface/aggregation_functions/core/adaptive_aggregation.py

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add some test cases for databases module

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Fix bugs for databases module unittest

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Update unit tests for component module

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Restore workflow config and update some comments

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Enable save_ test case.
Add yaml under test dir for unit test usage.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove plan to new dir.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove plan to new dir.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add aggregator start test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 2 aggregator test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 1 aggregator test case.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Format code.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Refactor code.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add collaborator start test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 1 collaborator test case.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Format with flake8

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove TODO comments

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

---------

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>
Co-authored-by: Wang, Wenjie <wenjie2.wang@intel.com>
Co-authored-by: Lei5 Chen <lei5.chen@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add PyTorch linear regression example (#808)

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster.

    The model is defined by Pytorch which is able to run over both cpu (by default) and gpu. The dataset is generated by make_regression from sklearn.datasets with pre-defined parameters.

    Fixes #797

    Co-authored-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: He, Dan H <dan.h.he@intel.com>
    Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* This prints out the hash of the CSR to disk for both the aggregator and (#813)

* This prints out the hash of the CSR to disk for both the aggregator and
collaborator. The user then compares and approves this hash with the
hash printed out of the file to validate the CSR. In addition, a warning
message is pritned if certify is run in silent mode.

Fixes securefederatedai#692

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Refactor read_csr function to use get_csr_hash

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Ask to check hashes before prompt

---------

Signed-off-by: Grant Baker <grant.baker@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Improve workspace requirements import (#810)

Remove the dump_requirement_file operation in export_ method.

            Fixes securefederatedai#767

            Co-authored-by: Li, Qingqing <qingqing.li@intel.com>
            Co-authored-by: Wu, Caili <caili.wu@intel.com>
            Signed-off-by: He, Dan H <dan.h.he@intel.com>
            Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
            Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
            Signed-off-by: Wang, Le <le3.wang@intel.com>
            Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Issue 506 Added Example using FedProx (#818)

* created new ineractive_api dir to hold pytorch fedprox mnist example

corrected files

changed to FedProxOptimizer and ran set_old_weights for new FedProx Pytorch example

renamed FedProx notebook

used mode.parrameters() to get pytorch model weights

got weights using state_dict

changed old wieghts to list (for serialization) and fixed README

input wieghts before zero_grad

[Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: #506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* [Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: securefederatedai#506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* Update README.md

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* addressed comments by psfoley: corrected words in the jupyter notebook metadata and added a link to the FedProx paper in the README.

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* [Bug: 768] FX CLI: Separate create, cert gen commands (#807)

This change separates existing command
"fx collaborator.py generate-cert-request" command into two
commands.
"fx collaborator create -n {NAME} -d {DATA_PATH: optional}".
"fx collaborator generate-cert-request -n {NAME}".

Fixes #768

Signed-off-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Co-authored-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add new tutorial example to OpenFL interactive API (#812)

* Add new tutorial example to OpenFL interactive API

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster

The model is defined by scikit-learn which is able to run over both cpu (by default) and gpu. The dataset is 1-dimensional noisy data of sinusoid with pre-defined parameters.

Fixes #798

Co-authored-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>

Signed-off-by: Yi CAO <yi2.cao@intel.com>

* reduced requirements.txt in workspace

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* build(deps): bump tensorflow in /openfl-workspace/tf_cnn_histology (#776)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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* build(deps): bump tensorflow (#777)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update GaNDLF repo location and test CI with master branch

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update GaNDLF repo location and test CI with master branch

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update GaNDLF repo location and test CI with master branch

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix documentation links. Change path names and templates for CI

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix paths

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix paths

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix breaking tests

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add compatible onnx version to requirements.txt file

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong csv file name

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong csv file name

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong names in workflow file

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong data path

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix lint in test_gandlf.py

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix lint errors

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>
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Signed-off-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Signed-off-by: Yi CAO <yi2.cao@intel.com>
Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
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Co-authored-by: akantak <aleksander.kantak@intel.com>
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Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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* Fixed GaNDLF rst issues. Add sphinxcontrib-mermaid (#841)

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fix GaNDLF documentation links (#842)

* Fixed GaNDLF rst issues. Add sphinxcontrib-mermaid

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix links in GaNDLF Documentation

* Fixed GaNDLF rst issues. Add sphinxcontrib-mermaid

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix links in GaNDLF Documentation

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fix incorrectly formatted link in docs (#839)

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolving merge conflicts in local-runtime.py

Integrated aggregator as stateful actor branch, tested.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

--------
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump onnx in /openfl-workspace/gandlf_seg_test (#840)

Bumps [onnx](https://github.com/onnx/onnx) from 1.12 to 1.13.0.
- [Release notes](https://github.com/onnx/onnx/releases)
- [Changelog](https://github.com/onnx/onnx/blob/main/docs/Changelog.md)
- [Commits](https://github.com/onnx/onnx/compare/v1.12.0...v1.13.0)

---
updated-dependencies:
- dependency-name: onnx
  dependency-type: direct:production
...

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* Merged changes of remove-torch-dependency branch

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update setup.py

Upgrading protobuf to 3.20.3 as per tensorboard requirement

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolving merge conflicts

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Accessibility updates (#861)

* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes #848

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_nlp (#773)

* build(deps): bump tensorflow in /openfl-workspace/keras_nlp

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update RMSProp optimizer import

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* flake8

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Patrick Foley <psfoley@gmail.com>
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* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_cnn_mnist (#771)

* build(deps): bump tensorflow in /openfl-workspace/keras_cnn_mnist

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>

* revert experimental Adam to legacy (#863)

Signed-off-by: kta-intel <kevin.ta@intel.com>

---------

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Signed-off-by: kta-intel <kevin.ta@intel.com>
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Co-authored-by: Kevin Ta <116312994+kta-intel@users.noreply.github.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_cnn_with_compression (#770)

* build(deps): bump tensorflow

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update Adam Optimizer import

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
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* build(deps): bump tensorflow from 2.9.3 to 2.11.1 in /openfl-tutorials/interactive_api/Flax_CNN_CIFAR (#775)

* build(deps): bump tensorflow

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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* Fixed breaking backages

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add quiet flag back to pip install

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

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* build(deps): bump tensorflow-cpu from 2.8.4 to 2.11.1 in /openfl-workspace/keras_nlp_gramine_ready (#769)

* build(deps): bump tensorflow-cpu

Bumps [tensorflow-cpu](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow-cpu
  dependency-type: direct:production
...

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* Use legacy RMSprop optimizer

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

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Signed-off-by: Patrick Foley <psfoley@gmail.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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* Accessibility color contrast fixes (#864)

* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes #848

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Color contrast updates for accessibility

Color contrast updates for accessibility
- update generic `a` element
- update color of links in the toggle-able read-the-docs panel
- update the color of the text in search results
- update the color of notes headers

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Tweak link color so it’s not so aggressive (#865)

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /tests/github/interactive_api_director/experiments/tensorflow_mnist/envoy (#772)

* build(deps): bump tensorflow

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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* Update sd_requirements.txt

* revert to legacy SGD and install tensorflow==2.11 for workflow

Signed-off-by: kta-intel <kevin.ta@intel.com>

---------

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* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/tf_2dunet (#774)

* build(deps): bump tensorflow in /openfl-workspace/tf_2dunet

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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* Update requirements.txt

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nammbash pushed a commit to nammbash/openfl that referenced this issue Feb 29, 2024
* Fix flake8 error in local runtime (#764)

* Removes unnecessary dict comprehension

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* Removes unnecessary dict comprehension

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* Update ROADMAP.md (#765)

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* Update ROADMAP.md (#785)

Typos

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* Updated integrations to GaNDLF (#781)

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* Fix Flake8 C419 for Ubuntu CI (#800)

C419 Unnecessary list comprehension passed to any()/all() prevents short-circuiting - rewrite as a generator

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* Recusrsion removal + Serialization removal integrated

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* Incoporated Review Comments

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* Removed commented code

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Implemented new approach, two example files given
1. Workflow_Interface_101_MNIST.py
2. Workflow_Interface_301_MNIST_Watermarking.py

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Internal Review Comments Incorporated

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* No private attributes are required

If private attributes are not provided, by default take an empty dictionary no need to pass a callable function.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update participants.py

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added a check for GPU Resource Allocation

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified error message for resource allocation

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolved bug found during testing phase

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modifide all the test cases, and following tutorials
1. Privacy Meter
2. FedProx

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added following test cases:
1. Workflow_Interface_101_MNIST.ipynb
2. Workflow_Interface_102_Aggregator_Validation.ipynb
3. Workflow_Interface_301_MNIST_Watermarking.ipynb
4. Workflow_Interface_201_Exclusive_GPUs_with_Ray.ipynb
5. Workflow_Interface_103_Cyclic_Institutional_Incremental_Learning.ipynb

Signed-off-by: Parth Mandaliya <Parthx.Mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified and Added Global_DP tutorials.

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified and Added tutorial Workflow-Interface_201_Exclusive_GPUs_with_Ray.ipynb

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified documentation for Workflow_Interface_201 tutorial.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* fixed flake-8 errors

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* reverted import module code

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolved merge conflicts in local_runtime.py
---------
Fix flake8 error in local runtime (#764)

* Removes unnecessary dict comprehension

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Removes unnecessary dict comprehension

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
---------

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update README.md

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fix warnings and issues in docs (#825)

* Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

* fixup! Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

---------

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Add Logo (#827)

* Add Logo

* Update README.md

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Change OpenFL documentation font to improve accessibility (#809)

This replaces the font of OpenFL documents with Intel One Mono font for low vision developers.

    Known issues:
    1. The text font within the images has not been changed.
    2. Some icons that do not exist in the new font cannot be displayed properly.

    Fixes securefederatedai#799

    Co-authored-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: He, Dan H <dan.h.he@intel.com>
    Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Co-authored-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update unit tests to improve code coverage (#821)

* Update ci config

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add unit test for following files

- openfl/federated/plan/plan.py
- openfl/interface/aggregation_functions/core/adaptive_aggregation.py

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add some test cases for databases module

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Fix bugs for databases module unittest

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Update unit tests for component module

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Restore workflow config and update some comments

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Enable save_ test case.
Add yaml under test dir for unit test usage.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove plan to new dir.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove plan to new dir.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add aggregator start test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 2 aggregator test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 1 aggregator test case.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Format code.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Refactor code.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add collaborator start test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 1 collaborator test case.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Format with flake8

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove TODO comments

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

---------

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>
Co-authored-by: Wang, Wenjie <wenjie2.wang@intel.com>
Co-authored-by: Lei5 Chen <lei5.chen@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Add PyTorch linear regression example (#808)

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster.

    The model is defined by Pytorch which is able to run over both cpu (by default) and gpu. The dataset is generated by make_regression from sklearn.datasets with pre-defined parameters.

    Fixes #797

    Co-authored-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: He, Dan H <dan.h.he@intel.com>
    Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* This prints out the hash of the CSR to disk for both the aggregator and (#813)

* This prints out the hash of the CSR to disk for both the aggregator and
collaborator. The user then compares and approves this hash with the
hash printed out of the file to validate the CSR. In addition, a warning
message is pritned if certify is run in silent mode.

Fixes securefederatedai#692

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Refactor read_csr function to use get_csr_hash

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Ask to check hashes before prompt

---------

Signed-off-by: Grant Baker <grant.baker@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Improve workspace requirements import (#810)

Remove the dump_requirement_file operation in export_ method.

            Fixes securefederatedai#767

            Co-authored-by: Li, Qingqing <qingqing.li@intel.com>
            Co-authored-by: Wu, Caili <caili.wu@intel.com>
            Signed-off-by: He, Dan H <dan.h.he@intel.com>
            Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
            Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
            Signed-off-by: Wang, Le <le3.wang@intel.com>
            Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Issue 506 Added Example using FedProx (#818)

* created new ineractive_api dir to hold pytorch fedprox mnist example

corrected files

changed to FedProxOptimizer and ran set_old_weights for new FedProx Pytorch example

renamed FedProx notebook

used mode.parrameters() to get pytorch model weights

got weights using state_dict

changed old wieghts to list (for serialization) and fixed README

input wieghts before zero_grad

[Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: #506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* [Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: securefederatedai#506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* Update README.md

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* addressed comments by psfoley: corrected words in the jupyter notebook metadata and added a link to the FedProx paper in the README.

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* [Bug: 768] FX CLI: Separate create, cert gen commands (#807)

This change separates existing command
"fx collaborator.py generate-cert-request" command into two
commands.
"fx collaborator create -n {NAME} -d {DATA_PATH: optional}".
"fx collaborator generate-cert-request -n {NAME}".

Fixes #768

Signed-off-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Co-authored-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Add new tutorial example to OpenFL interactive API (#812)

* Add new tutorial example to OpenFL interactive API

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster

The model is defined by scikit-learn which is able to run over both cpu (by default) and gpu. The dataset is 1-dimensional noisy data of sinusoid with pre-defined parameters.

Fixes #798

Co-authored-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>

Signed-off-by: Yi CAO <yi2.cao@intel.com>

* reduced requirements.txt in workspace

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow in /openfl-workspace/tf_cnn_histology (#776)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow (#777)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Running a federation with GaNDLF Documentation (#794)

* Initial commit of Running the federation with GaNDLF Documentation

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update README.md

Removed references to Intel's ownship, given it's now owned by the LF AI and Data.

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix Flake8 C419 for Ubuntu CI (#800)

C419 Unnecessary list comprehension passed to any()/all() prevents short-circuiting - rewrite as a generator

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update README.md

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix warnings and issues in docs (#825)

* Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

* fixup! Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

---------

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add Logo (#827)

* Add Logo

* Update README.md

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Change OpenFL documentation font to improve accessibility (#809)

This replaces the font of OpenFL documents with Intel One Mono font for low vision developers.

    Known issues:
    1. The text font within the images has not been changed.
    2. Some icons that do not exist in the new font cannot be displayed properly.

    Fixes securefederatedai#799

    Co-authored-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: He, Dan H <dan.h.he@intel.com>
    Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Co-authored-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update unit tests to improve code coverage (#821)

* Update ci config

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add unit test for following files

- openfl/federated/plan/plan.py
- openfl/interface/aggregation_functions/core/adaptive_aggregation.py

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add some test cases for databases module

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Fix bugs for databases module unittest

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Update unit tests for component module

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Restore workflow config and update some comments

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Enable save_ test case.
Add yaml under test dir for unit test usage.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove plan to new dir.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove plan to new dir.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add aggregator start test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 2 aggregator test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 1 aggregator test case.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Format code.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Refactor code.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add collaborator start test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 1 collaborator test case.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Format with flake8

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove TODO comments

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

---------

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>
Co-authored-by: Wang, Wenjie <wenjie2.wang@intel.com>
Co-authored-by: Lei5 Chen <lei5.chen@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add PyTorch linear regression example (#808)

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster.

    The model is defined by Pytorch which is able to run over both cpu (by default) and gpu. The dataset is generated by make_regression from sklearn.datasets with pre-defined parameters.

    Fixes #797

    Co-authored-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: He, Dan H <dan.h.he@intel.com>
    Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* This prints out the hash of the CSR to disk for both the aggregator and (#813)

* This prints out the hash of the CSR to disk for both the aggregator and
collaborator. The user then compares and approves this hash with the
hash printed out of the file to validate the CSR. In addition, a warning
message is pritned if certify is run in silent mode.

Fixes securefederatedai#692

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Refactor read_csr function to use get_csr_hash

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Ask to check hashes before prompt

---------

Signed-off-by: Grant Baker <grant.baker@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Improve workspace requirements import (#810)

Remove the dump_requirement_file operation in export_ method.

            Fixes securefederatedai#767

            Co-authored-by: Li, Qingqing <qingqing.li@intel.com>
            Co-authored-by: Wu, Caili <caili.wu@intel.com>
            Signed-off-by: He, Dan H <dan.h.he@intel.com>
            Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
            Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
            Signed-off-by: Wang, Le <le3.wang@intel.com>
            Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Issue 506 Added Example using FedProx (#818)

* created new ineractive_api dir to hold pytorch fedprox mnist example

corrected files

changed to FedProxOptimizer and ran set_old_weights for new FedProx Pytorch example

renamed FedProx notebook

used mode.parrameters() to get pytorch model weights

got weights using state_dict

changed old wieghts to list (for serialization) and fixed README

input wieghts before zero_grad

[Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: #506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* [Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: securefederatedai#506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* Update README.md

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* addressed comments by psfoley: corrected words in the jupyter notebook metadata and added a link to the FedProx paper in the README.

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* [Bug: 768] FX CLI: Separate create, cert gen commands (#807)

This change separates existing command
"fx collaborator.py generate-cert-request" command into two
commands.
"fx collaborator create -n {NAME} -d {DATA_PATH: optional}".
"fx collaborator generate-cert-request -n {NAME}".

Fixes #768

Signed-off-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Co-authored-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add new tutorial example to OpenFL interactive API (#812)

* Add new tutorial example to OpenFL interactive API

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster

The model is defined by scikit-learn which is able to run over both cpu (by default) and gpu. The dataset is 1-dimensional noisy data of sinusoid with pre-defined parameters.

Fixes #798

Co-authored-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>

Signed-off-by: Yi CAO <yi2.cao@intel.com>

* reduced requirements.txt in workspace

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* build(deps): bump tensorflow in /openfl-workspace/tf_cnn_histology (#776)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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* build(deps): bump tensorflow (#777)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update GaNDLF repo location and test CI with master branch

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update GaNDLF repo location and test CI with master branch

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update GaNDLF repo location and test CI with master branch

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix documentation links. Change path names and templates for CI

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix paths

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix paths

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix breaking tests

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add compatible onnx version to requirements.txt file

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong csv file name

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong csv file name

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong names in workflow file

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong data path

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix lint in test_gandlf.py

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix lint errors

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>
Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
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Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
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Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Signed-off-by: Yi CAO <yi2.cao@intel.com>
Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Co-authored-by: Prashant Shah <40899779+SprashAI@users.noreply.github.com>
Co-authored-by: akantak <aleksander.kantak@intel.com>
Co-authored-by: wangleflex <106506636+wangleflex@users.noreply.github.com>
Co-authored-by: He, Dan H <dan.h.he@intel.com>
Co-authored-by: xiaoranf <desolatefang@gmail.com>
Co-authored-by: Wang, Wenjie <wenjie2.wang@intel.com>
Co-authored-by: Lei5 Chen <lei5.chen@intel.com>
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Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fixed GaNDLF rst issues. Add sphinxcontrib-mermaid (#841)

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fix GaNDLF documentation links (#842)

* Fixed GaNDLF rst issues. Add sphinxcontrib-mermaid

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix links in GaNDLF Documentation

* Fixed GaNDLF rst issues. Add sphinxcontrib-mermaid

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix links in GaNDLF Documentation

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fix incorrectly formatted link in docs (#839)

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolving merge conflicts in local-runtime.py

Integrated aggregator as stateful actor branch, tested.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

--------
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump onnx in /openfl-workspace/gandlf_seg_test (#840)

Bumps [onnx](https://github.com/onnx/onnx) from 1.12 to 1.13.0.
- [Release notes](https://github.com/onnx/onnx/releases)
- [Changelog](https://github.com/onnx/onnx/blob/main/docs/Changelog.md)
- [Commits](https://github.com/onnx/onnx/compare/v1.12.0...v1.13.0)

---
updated-dependencies:
- dependency-name: onnx
  dependency-type: direct:production
...

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* Merged changes of remove-torch-dependency branch

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update setup.py

Upgrading protobuf to 3.20.3 as per tensorboard requirement

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolving merge conflicts

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Accessibility updates (#861)

* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes #848

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_nlp (#773)

* build(deps): bump tensorflow in /openfl-workspace/keras_nlp

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update RMSProp optimizer import

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* flake8

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Patrick Foley <psfoley@gmail.com>
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Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_cnn_mnist (#771)

* build(deps): bump tensorflow in /openfl-workspace/keras_cnn_mnist

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>

* revert experimental Adam to legacy (#863)

Signed-off-by: kta-intel <kevin.ta@intel.com>

---------

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Signed-off-by: kta-intel <kevin.ta@intel.com>
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Co-authored-by: Kevin Ta <116312994+kta-intel@users.noreply.github.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_cnn_with_compression (#770)

* build(deps): bump tensorflow

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update Adam Optimizer import

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.9.3 to 2.11.1 in /openfl-tutorials/interactive_api/Flax_CNN_CIFAR (#775)

* build(deps): bump tensorflow

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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* Fixed breaking backages

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add quiet flag back to pip install

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

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* build(deps): bump tensorflow-cpu from 2.8.4 to 2.11.1 in /openfl-workspace/keras_nlp_gramine_ready (#769)

* build(deps): bump tensorflow-cpu

Bumps [tensorflow-cpu](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow-cpu
  dependency-type: direct:production
...

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* Use legacy RMSprop optimizer

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

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Signed-off-by: Patrick Foley <psfoley@gmail.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Accessibility color contrast fixes (#864)

* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes #848

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Color contrast updates for accessibility

Color contrast updates for accessibility
- update generic `a` element
- update color of links in the toggle-able read-the-docs panel
- update the color of the text in search results
- update the color of notes headers

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Tweak link color so it’s not so aggressive (#865)

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /tests/github/interactive_api_director/experiments/tensorflow_mnist/envoy (#772)

* build(deps): bump tensorflow

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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* Update sd_requirements.txt

* revert to legacy SGD and install tensorflow==2.11 for workflow

Signed-off-by: kta-intel <kevin.ta@intel.com>

---------

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* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/tf_2dunet (#774)

* build(deps): bump tensorflow in /openfl-workspace/tf_2dunet

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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* Update requirements.txt

to retrigger CI

* Update requirements.txt

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* testing virtual env for windows github actions

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* fix indentation

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* Apply suggestions from code review

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Fixed issue in 103 Cyclic Institutional Incremental Learning tutorial

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* Update

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* Update

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* Update

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* Updated

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* Updated

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---------

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---------

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Testflow for verifying stdout redirection to Metaflow datastore (#758)

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* Update Hadolint threshold to flag errors only

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---------

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* lint fixes

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psfoley added a commit that referenced this issue Mar 1, 2024
* Federated Runtime v1.0
experimental Aggregator and Collaborator in working condition

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
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* Added test, and mnist experimental workspaces working prototype

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* Working on integration with Ishant's, and Keerti's code

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* Second half of integration installment.

Remaning:
   Integration of data.yaml file.

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* Removing unnecessary directory my_federation.

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* 1. Removed unncessart files.
2. Fix `fx plan freeze` command not working issue.

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* Added function for test workspace

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* Added include_exclude testcase workspace.

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* Default execution workspace is mnist.

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* data.yaml changes are integrated with this update.

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* Running a federation with GaNDLF Documentation (#794)

* Initial commit of Running the federation with GaNDLF Documentation

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* Update docs/running_the_federation_with_gandlf.rst

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* Update docs/running_the_federation_with_gandlf.rst

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* Update docs/running_the_federation_with_gandlf.rst

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* Update docs/running_the_federation_with_gandlf.rst

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* Update docs/running_the_federation_with_gandlf.rst

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* Update docs/running_the_federation_with_gandlf.rst

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* Update docs/running_the_federation_with_gandlf.rst

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* Update docs/running_the_federation_with_gandlf.rst

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* Update docs/running_the_federation_with_gandlf.rst

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* Update docs/running_the_federation_with_gandlf.rst

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* Update README.md

Removed references to Intel's ownship, given it's now owned by the LF AI and Data.

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* Fix Flake8 C419 for Ubuntu CI (#800)

C419 Unnecessary list comprehension passed to any()/all() prevents short-circuiting - rewrite as a generator

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* Update README.md

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* Fix warnings and issues in docs (#825)

* Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

* fixup! Fix warnings and issues in docs

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---------

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* Add Logo (#827)

* Add Logo

* Update README.md

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* Change OpenFL documentation font to improve accessibility (#809)

This replaces the font of OpenFL documents with Intel One Mono font for low vision developers.

    Known issues:
    1. The text font within the images has not been changed.
    2. Some icons that do not exist in the new font cannot be displayed properly.

    Fixes securefederatedai#799

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    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

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* Update unit tests to improve code coverage (#821)

* Update ci config

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* Add unit test for following files

- openfl/federated/plan/plan.py
- openfl/interface/aggregation_functions/core/adaptive_aggregation.py

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* Remove plan to new dir.

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* Add 2 aggregator test cases.

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* Add 1 aggregator test case.

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* Add collaborator start test cases.

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* Add 1 collaborator test case.

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* Format with flake8

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* Remove TODO comments

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---------

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Co-authored-by: Wang, Wenjie <wenjie2.wang@intel.com>
Co-authored-by: Lei5 Chen <lei5.chen@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add PyTorch linear regression example (#808)

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster.

    The model is defined by Pytorch which is able to run over both cpu (by default) and gpu. The dataset is generated by make_regression from sklearn.datasets with pre-defined parameters.

    Fixes #797

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    Signed-off-by: Wu, Caili <caili.wu@intel.com>

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Signed-off-by: Patrick Foley <psfoley@gmail.com>

* This prints out the hash of the CSR to disk for both the aggregator and (#813)

* This prints out the hash of the CSR to disk for both the aggregator and
collaborator. The user then compares and approves this hash with the
hash printed out of the file to validate the CSR. In addition, a warning
message is pritned if certify is run in silent mode.

Fixes securefederatedai#692

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Refactor read_csr function to use get_csr_hash

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Ask to check hashes before prompt

---------

Signed-off-by: Grant Baker <grant.baker@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Improve workspace requirements import (#810)

Remove the dump_requirement_file operation in export_ method.

            Fixes securefederatedai#767

            Co-authored-by: Li, Qingqing <qingqing.li@intel.com>
            Co-authored-by: Wu, Caili <caili.wu@intel.com>
            Signed-off-by: He, Dan H <dan.h.he@intel.com>
            Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
            Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
            Signed-off-by: Wang, Le <le3.wang@intel.com>
            Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Issue 506 Added Example using FedProx (#818)

* created new ineractive_api dir to hold pytorch fedprox mnist example

corrected files

changed to FedProxOptimizer and ran set_old_weights for new FedProx Pytorch example

renamed FedProx notebook

used mode.parrameters() to get pytorch model weights

got weights using state_dict

changed old wieghts to list (for serialization) and fixed README

input wieghts before zero_grad

[Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: #506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* [Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: securefederatedai#506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* Update README.md

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* addressed comments by psfoley: corrected words in the jupyter notebook metadata and added a link to the FedProx paper in the README.

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* [Bug: 768] FX CLI: Separate create, cert gen commands (#807)

This change separates existing command
"fx collaborator.py generate-cert-request" command into two
commands.
"fx collaborator create -n {NAME} -d {DATA_PATH: optional}".
"fx collaborator generate-cert-request -n {NAME}".

Fixes #768

Signed-off-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Co-authored-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add new tutorial example to OpenFL interactive API (#812)

* Add new tutorial example to OpenFL interactive API

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster

The model is defined by scikit-learn which is able to run over both cpu (by default) and gpu. The dataset is 1-dimensional noisy data of sinusoid with pre-defined parameters.

Fixes #798

Co-authored-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>

Signed-off-by: Yi CAO <yi2.cao@intel.com>

* reduced requirements.txt in workspace

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* build(deps): bump tensorflow in /openfl-workspace/tf_cnn_histology (#776)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
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- dependency-name: tensorflow
  dependency-type: direct:production
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* build(deps): bump tensorflow (#777)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
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- dependency-name: tensorflow
  dependency-type: direct:production
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* Update GaNDLF repo location and test CI with master branch

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update GaNDLF repo location and test CI with master branch

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update GaNDLF repo location and test CI with master branch

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix documentation links. Change path names and templates for CI

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix paths

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix paths

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix breaking tests

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add compatible onnx version to requirements.txt file

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong csv file name

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong csv file name

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong names in workflow file

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong data path

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix lint in test_gandlf.py

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix lint errors

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>
Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
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Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
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Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Signed-off-by: Yi CAO <yi2.cao@intel.com>
Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
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Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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* Fixed GaNDLF rst issues. Add sphinxcontrib-mermaid (#841)

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fix GaNDLF documentation links (#842)

* Fixed GaNDLF rst issues. Add sphinxcontrib-mermaid

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix links in GaNDLF Documentation

* Fixed GaNDLF rst issues. Add sphinxcontrib-mermaid

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix links in GaNDLF Documentation

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fix incorrectly formatted link in docs (#839)

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added licensing information to all experimental workspaces

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Made changes to LocalRuntime, and tested

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Rename collaborator_name variable to name in
experimental/component/collaborator/collaborator.py file.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump onnx in /openfl-workspace/gandlf_seg_test (#840)

Bumps [onnx](https://github.com/onnx/onnx) from 1.12 to 1.13.0.
- [Release notes](https://github.com/onnx/onnx/releases)
- [Changelog](https://github.com/onnx/onnx/blob/main/docs/Changelog.md)
- [Commits](https://github.com/onnx/onnx/compare/v1.12.0...v1.13.0)

---
updated-dependencies:
- dependency-name: onnx
  dependency-type: direct:production
...

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* Selected collaborators functionality added, test workspace of the same
is work-progress.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Selected collaborator testcases included with this commit.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Testcase private attributes workspace added with this commit.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Instead of remove private attributes from checkpoint, changed the value
to string "Private attributes: Not Available."

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added / Modified types of funciton arguments, and their return types.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Aggregator shutdown related changes are done in this commit

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update testflow_subset_of_collaborators.py

Updated subset of collaborators testcase

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified subset of collaborators testcase.

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Add files via upload

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Accessibility updates (#861)

* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes #848

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_nlp (#773)

* build(deps): bump tensorflow in /openfl-workspace/keras_nlp

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update RMSProp optimizer import

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* flake8

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

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* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_cnn_mnist (#771)

* build(deps): bump tensorflow in /openfl-workspace/keras_cnn_mnist

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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* revert experimental Adam to legacy (#863)

Signed-off-by: kta-intel <kevin.ta@intel.com>

---------

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Signed-off-by: kta-intel <kevin.ta@intel.com>
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Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_cnn_with_compression (#770)

* build(deps): bump tensorflow

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
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  dependency-type: direct:production
...

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* Update Adam Optimizer import

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---------

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Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
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* build(deps): bump tensorflow from 2.9.3 to 2.11.1 in /openfl-tutorials/interactive_api/Flax_CNN_CIFAR (#775)

* build(deps): bump tensorflow

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
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- dependency-name: tensorflow
  dependency-type: direct:production
...

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* Fixed breaking backages

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add quiet flag back to pip install

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

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* build(deps): bump tensorflow-cpu from 2.8.4 to 2.11.1 in /openfl-workspace/keras_nlp_gramine_ready (#769)

* build(deps): bump tensorflow-cpu

Bumps [tensorflow-cpu](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
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* Use legacy RMSprop optimizer

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

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* Accessibility color contrast fixes (#864)

* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes #848

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Color contrast updates for accessibility

Color contrast updates for accessibility
- update generic `a` element
- update color of links in the toggle-able read-the-docs panel
- update the color of the text in search results
- update the color of notes headers

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
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* Testflow for verifying stdout redirection to Metaflow datastore (#758)

* implemented ray.wait

* reverted changes back after testing

* adding datastore cli test case

* removed unused variables

* removed stderr validation

* fixed lint suggestions

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
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* Tweak link color so it’s not so aggressive (#865)

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
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* External Loop Functionality Added

External Loop Functionality Added

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
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* External Loop Functionality Added

External Loop Functionality Added

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* External Loop Functionality Added

External Loop Functionality Added

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
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* Added following tutorials, and testcase:
1. Vertical FL
2. Vertical FL Two Party
3. Internal Loop

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* plan.yaml modified in 301 watermarking, and subset of collaborators.

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* Modifying temp.sh for 2 collaborators.

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* Update aggregator.py

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* FQDN switched to localhost

FQDN switched to localhost

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* While activating experimental OpenFL commands, install depedencies as well.

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* Install experimental requirements while activating experimental openfl commands.

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* Update experimental-requirements.txt

Added ray 2.2.0 to experimental-requirements.txt file

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* Update requirements_workflow_interface.txt

Metaflow, and Ray dependencies are moved to openfl-workspace/experimental/experimental-requrirements.txt file.

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* Delete openfl/experimental/utilities/utils.py, and removed torch depency from openfl/experimental/utilities/resources.py

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* Update requirements_workflow_interface.txt

Updated experimental tutorials requirements.txt file

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* Updating 201 GPUs tutorial

Updated Workflow_Interface_201_Exclusive_GPUs_with_Ray.ipynb for Aggregator, and Collaborator as stateful actor

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* Modified 101, 102, 103, 301, 401 tutorials as per Aggregator, & Collaborator stateful collaborators

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* Excluding 'experimental' directory from workspace templates

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* Update 101 tutorial data.yaml

Updated 101 tutorials data.yaml to correct a mistake by in index parameter of private attribute function.

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* Update resources.py

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* Modified get_number_of_gpus function

Modify get_number_of_gpus function

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* This commit brings following changes:

1. Removed torch dependency from "get_number_of_gpus"
2. Added keras mnist example notebook
3. Added keras mnist workspace example
4. Removed openfl-workspace/experimental/experimental-requirements.txt
5. "fx aggregator start" command will install libraries from experimental tutorials requirements_workflow_interface.txt file
6. Added testcase_datastore_cli, testcase_reference and testcase_reference_with_include_exclude
7. Updated 101 torch mnist plan.yaml and data.yaml
8. Removed aggregator start flow thread from cli/aggregator.py
9. At last changes made in federated runtime

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* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /tests/github/interactive_api_director/experiments/tensorflow_mnist/envoy (#772)

* build(deps): bump tensorflow

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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* Update sd_requirements.txt

* revert to legacy SGD and install tensorflow==2.11 for workflow

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---------

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* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/tf_2dunet (#774)

* build(deps): bump tensorflow in /openfl-workspace/tf_2dunet

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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* Update requirements.txt

to retrigger CI

* Update requirements.txt

---------

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* This commit brings following changes:
1. Renamed Workflow_Interface_101_Keras_MNIST_with_GPU.ipynb to Workflow_Interface_104_Keras_MNIST_with_GPU.ipynb
2. Updated documentation in Workflow_Interface_104_Keras_MNIST_with_GPU.ipynb
3. protobuf bumped from 3.19.6 to 3.20.0 in setup.py
4. Incorporating review comments (WIP)

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified 104 Keras MNIST tutorial

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* This comming brings following changes:
1. Experimental Aggregator workflow testcases moved to test/github/experimental/workspace directory
2. Added dependecy related changes

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Removing unnecessary logs

Removing unnecessary logs

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update collaborator.py

Removing unnecessary logs

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Avoided deep copying the context by removing private attributes from context before checkpoint

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Incoporated review comments

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Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added dependecies to each tutorial notebooks

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* pinned tensorboardX (#870)

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* While taking aggregator step remove private attributes before taking checkpoint and set it back to ctx after checkpoint

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Removing unnecessary deepcopies from aggregator.py file

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Removing unnecessary comments

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update stream_redirect.py

Removing unnecessary imports

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added color escape sequences to datastore cli localruntime and workspace testcases

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update requirements_privacy_meter.txt

torch 1.13.1 requires torchvision 0.14.1 not 0.14.0

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Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update Workflow_Interface_VFL_Two_Party

Added actor related changed to Workflow_Interface_VFL_Two_Party

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Files added required to test experimental aggregator based workflow by GitHUB actions

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update Workflow_Interface_104_Keras_MNIST_with_GPU.ipynb

Removing GPU parameter from collaborator decorator.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update resources.py

Updated get_number_of_gpus function

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Updating import statement

In 104 keras workspace utils.py updating import SummaryWriter statement from torch to tensorflow

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* With this commit path of template can be explicitely given, user does not have to
choose from available example templates. Only applicable to experimental openfl.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fixed flake8 issues and typos

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolved flake8 issues,
Added warning statements when data.yaml is not found or aggregator / collaborator private attributes are not found in data.yaml,
Tested by running all tutorials and tests

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Moving the logs after data.yaml warning, and removing unnecessary blank lines.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Adding N-level arguments functionality

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update workflow_interface.rst

Added section on how to save best and last model from Metaflow CLI

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolving last few TODO items.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Updated logs to provide exact information to user.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* This commit brings following updates:
1. Remove unnecessary spaces from Workflow_Interface_102_Aggregator_Validation.ipynb
2. Upgraded protobuf to 3.20.3 in setup.py as per tensorboard requirements
3. Modified 101-torch-cnn-mnist workspace for n-level arguments
4. Added a federated runtime workspace for 102-aggregator-validation

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* This commit brings following changes:
1. Added 501_pytorch_tinyimagenet_transfer_learning workspace for experimental workflow interface
2. Removed `feature_shape` from openfl/experimental/interface/cli/plan.py
3. Resolved flake8 errors in openfl-workspace/experimental directory

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update data.yaml

Correcting a mistake train dataset assigned to test and vice versa.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update flow.py

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update flow.py

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Adding functionality to convert jupyter notebook to workspace (in progress)

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Write flow.py, collaborator_private_attrs.py and aggregator_private_attrs.py automatically

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Find aggregator, and collaborator arguments

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Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modifying arguments help

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Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Removed automatically generated Zone.Identifier file
Added Approach2 notebook
Modified creator.py

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* workspace_creator renamed to workspace_builder
finding values without help of any tags

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Finished exporting data.yaml, plan.yaml.
Workspace creator validated for 101 MNIST and 301 Watermarking with MNIST

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Removing round number constant argument from 301 MNIST WATERMARKING

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* * Created get_collaborator_kwargs function in localruntime class which takes collaborator name as argument and returns name of private attributes function and arguments required to call it.
* Changed workspace builder code used get_collaborator_kwargs function to build data.yaml file.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified get_collaborator_args function

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified workspace_builder/build.py file to resolve a typo

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Removed unnecessary files from template_workspace directory
Moved print_tree to after generating python script

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added documentation and inline comments for workspace_builder

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added libraries required by WorkspaceBuilder

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update Tensorflow, gRPC, Protobuf dependencies (#868)

* Update Tensorflow to latest, finally update grpcio/protobuf

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Lint issue fix and missing tf reference

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* pyzmq version fixed

* fix taskrunner tests for windows

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* fix taskrunner test syntax for windows

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* adding user option to workspace pip install requirements for windows

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* fix windows CI test

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* testing virtual env for windows github actions

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* testing virtual env for windows github actions

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* testing virtual env for windows github actions

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* testing venv for windows

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* test venv for windows

* test venv for windows

* Added new KerasSerializer. Fixed other Interactive API experiments

* Update taskrunner.yml

* Update taskrunner.yml

* Update workspace.py

* Update workspace.py

* Update taskrunner.yml

* Remove get_model import from global namespace so dependencies are not loaded into memory unnecessarily (breaking windows build)

* Refactoring and cleaning up imports to support Windows install

* Fixed logger import paths

* Fix missing imports

* Fix native import

* Fix lint errors

* Fix keras optimizer patch. Remove irrelevant unit test

* Format logs in UTF-8 for windows

* Update interactive-kvasir.yml

* Consolidate github actions python versions to single file

* Update python versions

* Update python versions

* Update python versions

* Reduce # of DataLoader workers for Pytorch Kvasir CI test

* Fix Windows encoding

* Fix Windows encoding and limit rounds so Github Actions CI doesn't run out of memory

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* Fix windows encoding

* Fix Windows encoding

---------

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Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>
Co-authored-by: Mansi Sharma <77758170+mansishr@users.noreply.github.com>
Co-authored-by: Mansi Sharma <mansi.sharma@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Add FL plan description to documentation (#872)

* Add plan description to documentation

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* fix indentation

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* Apply suggestions from code review

Co-authored-by: Patrick Foley <patrick.foley@intel.com>

---------

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>
Co-authored-by: Patrick Foley <patrick.foley@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolve Coverity Issues (#874)

* Fix coverity issues

* Resolve remaining coverity issues

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Migrate to Ubuntu 22.04 LTS release (supported through 2027) (#875)

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Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
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* Fixed flake8 issues

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fixed flake8 issues in test/experimental directory

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Accessibility updates (#861)

* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes #848

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* fixing FedAvg in workflow interface tutorials to be compatible with latest numpy stable release (1.24.3) (#833)

* fixing FedAvg averaging in order to be compatible with numpy v1.24+

Signed-off-by: kta-intel <kevin.ta@intel.com>

* uncommenting installations for consistency with other tutorials

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* fixing 301_MNIST_Watermarking tutorial FedAvg

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* fixing 301_MNIST_Watermarki
ng tutorial FedAvg

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* Switching to py38 kernel and clearing cell outputs

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---------

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* Testflow for verifying stdout redirection to Metaflow datastore (#758)

* implemented ray.wait

* reverted changes back after testing

* adding datastore cli test case

* removed unused variables

* removed stderr validation

* fixed lint suggestions

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* Resolving DCO issue

fixing FedAvg in workflow interface tutorials to be compatible with latest numpy stable release (1.24.3) (#833)

* fixing FedAvg averaging in order to be compatible with numpy v1.24+

Signed-off-by: kta-intel <kevin.ta@intel.com>

* uncommenting installations for consistency with other tutorials

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* fixing 301_MNIST_Watermarking tutorial FedAvg

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* fixing 301_MNIST_Watermarki
ng tutorial FedAvg

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* Switching to py38 kernel and clearing cell outputs

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---------

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* Update EdenPipeline in the documentation (#877)

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* Fixed flake8 issues

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* Added weighted_average aggregation function under openfl.experimental.interface.{keras,torch}.aggregation_funtions

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* Tested all local-runtime & federated-runtime tutorials and testcases

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* Resolving merge conflicts in experimental local-runtme tutorials 101, 103, 201, & 301

fixing FedAvg in workflow interface tutorials to be compatible with latest numpy stable release (1.24.3) (#833)

* fixing FedAvg averaging in order to be compatible with numpy v1.24+

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* uncommenting installations for consistency with other tutorials

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* fixing 301_MNIST_Watermarking tutorial FedAvg

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* fixing 301_MNIST_Watermarki
ng tutorial FedAvg

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* Switching to py38 kernel and clearing cell outputs

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---------

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---------

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* WIP: CI Scans (#873)

* Initial scans commit for bandit, hadolint, trivy

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* Address bandit scan results

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* Fix Trivy action

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* Fix linting

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* Add Coverity Badge

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* Update Hadolint threshold to flag errors only

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* Update Hadolint threshold to flag errors only

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---------

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* Update ROADMAP.md (#878)

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* This commit brings following changes:
1. Renaming workspace_builder module to workspace_export.
2. WorkspaceBuilder class renamed to WorkspaceExport.
3. Added WorkspaceExport.export function for user which wraps generate_requirements, generate_plan_yaml, generate_data_yaml functions.
4. Merged WorkspaceExport module to `fx workspace create` command by adding new following arguments:
    - `--notebook` Path to jupyter notebook
    - `--template_workspace_dir` Output path for generated workspace
5. WorkspaceExport removed from 101, and 103 tutorials.
6. setup.py changed accordingly.

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* This commit brings following changes:
1. output_dir renamed to output_workspace also the user must pass this parameter
 (default=/tmp is now removed) or there will be an error.
2. template_workspace_path is not required anymore.
3. Added a new tutorials Workflow_Interface_1001_Workspace_Creation_from_JupyterNotebook.ipynb
 (copy of Workflow_Interface_301_MNIST_Watermarking.ipynb) explaining how to use WorkspaceExport.

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* In Workflow_Interface_1001 tutorial list of collaborator are changed to 5 from 2

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* Uncommeted pip install libraries

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* Adding GPU for aggregator in 201, Global DP & Privacy Meter tutorials

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* Modifed documentation in 1001 tutorial

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* Modified documentation in 1001 tutorial

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* Fixing 'param' attribute not found issue. in 301, 1001 experimental tutrials and 301
mnist watermarking workspace.

Sol.
imagen library installs param depedency latest version
and param package got an upgrde recently. Pinned param to 1.13.0
after installing imagen which fixed the issue.

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* VFL 2 party example

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* participant names to lowercase and changes to instructions

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* Resolving missing packages from watermarking examples that break python 3.9+. Fix linting, spelling. Remove experimental aggregation functions

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* Remove duplicate files in openfl.experimental

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* Trigger CI

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* Moving test to be conditional

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* Fix inconsistent use of enumerate in loops

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* Fixing tests

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* Accomodate conversion of names to lower case

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* Missing torchvision dependency in tests

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* Fix lint issues

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---------

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manuelhsantana pushed a commit that referenced this issue Jul 10, 2024
* Fix flake8 error in local runtime (#764)

* Removes unnecessary dict comprehension

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* Removes unnecessary dict comprehension

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---------

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* Update ROADMAP.md (#765)

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* Update README.md

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* Update GOVERNANCE.md

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* Update ROADMAP.md (#785)

Typos

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* Updated integrations to GaNDLF (#781)

* renaming loader and runner

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* updated plan to pick the new names

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* new key name

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* allow the ability to pass a file to `gandlf_config_dict` in addition to fully-fledged parameters

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* checking this differently

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* rename variable for clarity

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---------

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* Update README.md

Removed references to Intel's ownship, given it's now owned by the LF AI and Data.

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* Fix Flake8 C419 for Ubuntu CI (#800)

C419 Unnecessary list comprehension passed to any()/all() prevents short-circuiting - rewrite as a generator

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* Introduced shard descriptor based collaborator private attributes

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* Adding batch size for train, and test in config.yaml file
Files modified:
1. config.yaml
2. mnist_shard_descriptor.py
3. Workflow_Interface_101_MNIST.ipynb
4. participants.py

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* Introducing multiple config yaml files

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* Removing unnecessary config.yaml file.

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* Added collaborator private atribute delayed initialization
for local_runtime

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* Incorporated review comments

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* Added multi-pricessing ray backend support and, aggregator yaml file

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* Updated multi-processing code

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* RayExecutor class moved from participants.py to localruntime.py

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* RayExecytor moved from interface/pariticipants.py to
runtime/local_runtime.py

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* Added Aggregator private attribute initialation in runtime

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* Removed unnecessary import statements

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* Code cleaned up, validated checkpoints manually

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* Refactored, and added some new doc string

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* Resolved Flake8 instructions

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* Recusrsion removal + Serialization removal integrated

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* Incoporated Review Comments

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* Removed configuration YAML files, and
added functionality to initialize private attributes by calling a
callback function created by end-user

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* Removed commented code

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* Implemented new approach, two example files given
1. Workflow_Interface_101_MNIST.py
2. Workflow_Interface_301_MNIST_Watermarking.py

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* Internal Review Comments Incorporated

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* No private attributes are required

If private attributes are not provided, by default take an empty dictionary no need to pass a callable function.

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* Update participants.py

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* Added a check for GPU Resource Allocation

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* Modified error message for resource allocation

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* Resolved bug found during testing phase

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* Modifide all the test cases, and following tutorials
1. Privacy Meter
2. FedProx

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* Added following test cases:
1. Workflow_Interface_101_MNIST.ipynb
2. Workflow_Interface_102_Aggregator_Validation.ipynb
3. Workflow_Interface_301_MNIST_Watermarking.ipynb
4. Workflow_Interface_201_Exclusive_GPUs_with_Ray.ipynb
5. Workflow_Interface_103_Cyclic_Institutional_Incremental_Learning.ipynb

Signed-off-by: Parth Mandaliya <Parthx.Mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified and Added Global_DP tutorials.

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified and Added tutorial Workflow-Interface_201_Exclusive_GPUs_with_Ray.ipynb

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified documentation for Workflow_Interface_201 tutorial.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* fixed flake-8 errors

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* reverted import module code

Signed-off-by: ParthM-GitHub <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolved merge conflicts in local_runtime.py
---------
Fix flake8 error in local runtime (#764)

* Removes unnecessary dict comprehension

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Removes unnecessary dict comprehension

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
---------

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update README.md

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fix warnings and issues in docs (#825)

* Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

* fixup! Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

---------

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Add Logo (#827)

* Add Logo

* Update README.md

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Change OpenFL documentation font to improve accessibility (#809)

This replaces the font of OpenFL documents with Intel One Mono font for low vision developers.

    Known issues:
    1. The text font within the images has not been changed.
    2. Some icons that do not exist in the new font cannot be displayed properly.

    Fixes securefederatedai#799

    Co-authored-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: He, Dan H <dan.h.he@intel.com>
    Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Co-authored-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update unit tests to improve code coverage (#821)

* Update ci config

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add unit test for following files

- openfl/federated/plan/plan.py
- openfl/interface/aggregation_functions/core/adaptive_aggregation.py

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add some test cases for databases module

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Fix bugs for databases module unittest

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Update unit tests for component module

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Restore workflow config and update some comments

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Enable save_ test case.
Add yaml under test dir for unit test usage.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove plan to new dir.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove plan to new dir.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add aggregator start test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 2 aggregator test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 1 aggregator test case.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Format code.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Refactor code.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add collaborator start test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 1 collaborator test case.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Format with flake8

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove TODO comments

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

---------

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>
Co-authored-by: Wang, Wenjie <wenjie2.wang@intel.com>
Co-authored-by: Lei5 Chen <lei5.chen@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Add PyTorch linear regression example (#808)

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster.

    The model is defined by Pytorch which is able to run over both cpu (by default) and gpu. The dataset is generated by make_regression from sklearn.datasets with pre-defined parameters.

    Fixes #797

    Co-authored-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: He, Dan H <dan.h.he@intel.com>
    Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* This prints out the hash of the CSR to disk for both the aggregator and (#813)

* This prints out the hash of the CSR to disk for both the aggregator and
collaborator. The user then compares and approves this hash with the
hash printed out of the file to validate the CSR. In addition, a warning
message is pritned if certify is run in silent mode.

Fixes securefederatedai#692

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Refactor read_csr function to use get_csr_hash

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Ask to check hashes before prompt

---------

Signed-off-by: Grant Baker <grant.baker@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Improve workspace requirements import (#810)

Remove the dump_requirement_file operation in export_ method.

            Fixes securefederatedai#767

            Co-authored-by: Li, Qingqing <qingqing.li@intel.com>
            Co-authored-by: Wu, Caili <caili.wu@intel.com>
            Signed-off-by: He, Dan H <dan.h.he@intel.com>
            Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
            Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
            Signed-off-by: Wang, Le <le3.wang@intel.com>
            Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Issue 506 Added Example using FedProx (#818)

* created new ineractive_api dir to hold pytorch fedprox mnist example

corrected files

changed to FedProxOptimizer and ran set_old_weights for new FedProx Pytorch example

renamed FedProx notebook

used mode.parrameters() to get pytorch model weights

got weights using state_dict

changed old wieghts to list (for serialization) and fixed README

input wieghts before zero_grad

[Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: #506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* [Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: securefederatedai#506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* Update README.md

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* addressed comments by psfoley: corrected words in the jupyter notebook metadata and added a link to the FedProx paper in the README.

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* [Bug: 768] FX CLI: Separate create, cert gen commands (#807)

This change separates existing command
"fx collaborator.py generate-cert-request" command into two
commands.
"fx collaborator create -n {NAME} -d {DATA_PATH: optional}".
"fx collaborator generate-cert-request -n {NAME}".

Fixes #768

Signed-off-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Co-authored-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Add new tutorial example to OpenFL interactive API (#812)

* Add new tutorial example to OpenFL interactive API

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster

The model is defined by scikit-learn which is able to run over both cpu (by default) and gpu. The dataset is 1-dimensional noisy data of sinusoid with pre-defined parameters.

Fixes #798

Co-authored-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>

Signed-off-by: Yi CAO <yi2.cao@intel.com>

* reduced requirements.txt in workspace

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow in /openfl-workspace/tf_cnn_histology (#776)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow (#777)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Running a federation with GaNDLF Documentation (#794)

* Initial commit of Running the federation with GaNDLF Documentation

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update README.md

Removed references to Intel's ownship, given it's now owned by the LF AI and Data.

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix Flake8 C419 for Ubuntu CI (#800)

C419 Unnecessary list comprehension passed to any()/all() prevents short-circuiting - rewrite as a generator

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update README.md

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix warnings and issues in docs (#825)

* Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

* fixup! Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

---------

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add Logo (#827)

* Add Logo

* Update README.md

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Change OpenFL documentation font to improve accessibility (#809)

This replaces the font of OpenFL documents with Intel One Mono font for low vision developers.

    Known issues:
    1. The text font within the images has not been changed.
    2. Some icons that do not exist in the new font cannot be displayed properly.

    Fixes securefederatedai#799

    Co-authored-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: He, Dan H <dan.h.he@intel.com>
    Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Co-authored-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update unit tests to improve code coverage (#821)

* Update ci config

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add unit test for following files

- openfl/federated/plan/plan.py
- openfl/interface/aggregation_functions/core/adaptive_aggregation.py

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add some test cases for databases module

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Fix bugs for databases module unittest

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Update unit tests for component module

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Restore workflow config and update some comments

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Enable save_ test case.
Add yaml under test dir for unit test usage.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove plan to new dir.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove plan to new dir.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add aggregator start test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 2 aggregator test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 1 aggregator test case.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Format code.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Refactor code.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add collaborator start test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 1 collaborator test case.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Format with flake8

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove TODO comments

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

---------

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>
Co-authored-by: Wang, Wenjie <wenjie2.wang@intel.com>
Co-authored-by: Lei5 Chen <lei5.chen@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add PyTorch linear regression example (#808)

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster.

    The model is defined by Pytorch which is able to run over both cpu (by default) and gpu. The dataset is generated by make_regression from sklearn.datasets with pre-defined parameters.

    Fixes #797

    Co-authored-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: He, Dan H <dan.h.he@intel.com>
    Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* This prints out the hash of the CSR to disk for both the aggregator and (#813)

* This prints out the hash of the CSR to disk for both the aggregator and
collaborator. The user then compares and approves this hash with the
hash printed out of the file to validate the CSR. In addition, a warning
message is pritned if certify is run in silent mode.

Fixes securefederatedai#692

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Refactor read_csr function to use get_csr_hash

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Ask to check hashes before prompt

---------

Signed-off-by: Grant Baker <grant.baker@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Improve workspace requirements import (#810)

Remove the dump_requirement_file operation in export_ method.

            Fixes securefederatedai#767

            Co-authored-by: Li, Qingqing <qingqing.li@intel.com>
            Co-authored-by: Wu, Caili <caili.wu@intel.com>
            Signed-off-by: He, Dan H <dan.h.he@intel.com>
            Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
            Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
            Signed-off-by: Wang, Le <le3.wang@intel.com>
            Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Issue 506 Added Example using FedProx (#818)

* created new ineractive_api dir to hold pytorch fedprox mnist example

corrected files

changed to FedProxOptimizer and ran set_old_weights for new FedProx Pytorch example

renamed FedProx notebook

used mode.parrameters() to get pytorch model weights

got weights using state_dict

changed old wieghts to list (for serialization) and fixed README

input wieghts before zero_grad

[Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: #506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* [Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: securefederatedai#506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* Update README.md

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* addressed comments by psfoley: corrected words in the jupyter notebook metadata and added a link to the FedProx paper in the README.

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* [Bug: 768] FX CLI: Separate create, cert gen commands (#807)

This change separates existing command
"fx collaborator.py generate-cert-request" command into two
commands.
"fx collaborator create -n {NAME} -d {DATA_PATH: optional}".
"fx collaborator generate-cert-request -n {NAME}".

Fixes #768

Signed-off-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Co-authored-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add new tutorial example to OpenFL interactive API (#812)

* Add new tutorial example to OpenFL interactive API

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster

The model is defined by scikit-learn which is able to run over both cpu (by default) and gpu. The dataset is 1-dimensional noisy data of sinusoid with pre-defined parameters.

Fixes #798

Co-authored-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>

Signed-off-by: Yi CAO <yi2.cao@intel.com>

* reduced requirements.txt in workspace

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* build(deps): bump tensorflow in /openfl-workspace/tf_cnn_histology (#776)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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* build(deps): bump tensorflow (#777)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
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- dependency-name: tensorflow
  dependency-type: direct:production
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Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update GaNDLF repo location and test CI with master branch

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update GaNDLF repo location and test CI with master branch

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update GaNDLF repo location and test CI with master branch

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix documentation links. Change path names and templates for CI

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix paths

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix paths

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix breaking tests

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add compatible onnx version to requirements.txt file

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong csv file name

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong csv file name

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong names in workflow file

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong data path

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix lint in test_gandlf.py

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix lint errors

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>
Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Signed-off-by: Yi CAO <yi2.cao@intel.com>
Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Co-authored-by: Prashant Shah <40899779+SprashAI@users.noreply.github.com>
Co-authored-by: akantak <aleksander.kantak@intel.com>
Co-authored-by: wangleflex <106506636+wangleflex@users.noreply.github.com>
Co-authored-by: He, Dan H <dan.h.he@intel.com>
Co-authored-by: xiaoranf <desolatefang@gmail.com>
Co-authored-by: Wang, Wenjie <wenjie2.wang@intel.com>
Co-authored-by: Lei5 Chen <lei5.chen@intel.com>
Co-authored-by: Beverly Klemme <35578090+bjklemme-intel@users.noreply.github.com>
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* Fixed GaNDLF rst issues. Add sphinxcontrib-mermaid (#841)

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fix GaNDLF documentation links (#842)

* Fixed GaNDLF rst issues. Add sphinxcontrib-mermaid

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix links in GaNDLF Documentation

* Fixed GaNDLF rst issues. Add sphinxcontrib-mermaid

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix links in GaNDLF Documentation

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

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Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fix incorrectly formatted link in docs (#839)

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolving merge conflicts in local-runtime.py

Integrated aggregator as stateful actor branch, tested.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>

--------
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump onnx in /openfl-workspace/gandlf_seg_test (#840)

Bumps [onnx](https://github.com/onnx/onnx) from 1.12 to 1.13.0.
- [Release notes](https://github.com/onnx/onnx/releases)
- [Changelog](https://github.com/onnx/onnx/blob/main/docs/Changelog.md)
- [Commits](https://github.com/onnx/onnx/compare/v1.12.0...v1.13.0)

---
updated-dependencies:
- dependency-name: onnx
  dependency-type: direct:production
...

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* Merged changes of remove-torch-dependency branch

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update setup.py

Upgrading protobuf to 3.20.3 as per tensorboard requirement

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolving merge conflicts

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Accessibility updates (#861)

* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes #848

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_nlp (#773)

* build(deps): bump tensorflow in /openfl-workspace/keras_nlp

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update RMSProp optimizer import

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* flake8

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---------

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Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_cnn_mnist (#771)

* build(deps): bump tensorflow in /openfl-workspace/keras_cnn_mnist

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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* revert experimental Adam to legacy (#863)

Signed-off-by: kta-intel <kevin.ta@intel.com>

---------

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Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_cnn_with_compression (#770)

* build(deps): bump tensorflow

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update Adam Optimizer import

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.9.3 to 2.11.1 in /openfl-tutorials/interactive_api/Flax_CNN_CIFAR (#775)

* build(deps): bump tensorflow

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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* Fixed breaking backages

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add quiet flag back to pip install

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

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* build(deps): bump tensorflow-cpu from 2.8.4 to 2.11.1 in /openfl-workspace/keras_nlp_gramine_ready (#769)

* build(deps): bump tensorflow-cpu

Bumps [tensorflow-cpu](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow-cpu
  dependency-type: direct:production
...

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* Use legacy RMSprop optimizer

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

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Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Accessibility color contrast fixes (#864)

* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes #848

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Color contrast updates for accessibility

Color contrast updates for accessibility
- update generic `a` element
- update color of links in the toggle-able read-the-docs panel
- update the color of the text in search results
- update the color of notes headers

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Tweak link color so it’s not so aggressive (#865)

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /tests/github/interactive_api_director/experiments/tensorflow_mnist/envoy (#772)

* build(deps): bump tensorflow

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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* Update sd_requirements.txt

* revert to legacy SGD and install tensorflow==2.11 for workflow

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* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/tf_2dunet (#774)

* build(deps): bump tensorflow in /openfl-workspace/tf_2dunet

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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* Update requirements.txt

to retrigger CI

* Update requirements.txt

---------

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* Update Tensorflow, gRPC, Protobuf dependencies (#868)

* Update Tensorflow to latest, finally update grpcio/protobuf

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Lint issue fix and missing tf reference

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* pyzmq version fixed

* fix taskrunner tests for windows

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* fix taskrunner test syntax for windows

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* adding user option to workspace pip install requirements for windows

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* fix windows CI test

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* testing virtual env for windows github actions

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* testing virtual env for windows github actions

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* testing virtual env for windows github actions

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* testing venv for windows

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* test venv for windows

* test venv for windows

* Added new KerasSerializer. Fixed other Interactive API experiments

* Update taskrunner.yml

* Update taskrunner.yml

* Update workspace.py

* Update workspace.py

* Update taskrunner.yml

* Remove get_model import from global namespace so dependencies are not loaded into memory unnecessarily (breaking windows build)

* Refactoring and cleaning up imports to support Windows install

* Fixed logger import paths

* Fix missing imports

* Fix native import

* Fix lint errors

* Fix keras optimizer patch. Remove irrelevant unit test

* Format logs in UTF-8 for windows

* Update interactive-kvasir.yml

* Consolidate github actions python versions to single file

* Update python versions

* Update python versions

* Update python versions

* Reduce # of DataLoader workers for Pytorch Kvasir CI test

* Fix Windows encoding

* Fix Windows encoding and limit rounds so Github Actions CI doesn't run out of memory

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix windows encoding

* Fix Windows encoding

---------

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Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>
Co-authored-by: Mansi Sharma <77758170+mansishr@users.noreply.github.com>
Co-authored-by: Mansi Sharma <mansi.sharma@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Add FL plan description to documentation (#872)

* Add plan description to documentation

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* fix indentation

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* Apply suggestions from code review

Co-authored-by: Patrick Foley <patrick.foley@intel.com>

---------

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>
Co-authored-by: Patrick Foley <patrick.foley@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolved flake8 issues

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* GPU Added for aggregator
Fixed issue in 103 Cyclic Institutional Incremental Learning tutorial

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolve Coverity Issues (#874)

* Fix coverity issues

* Resolve remaining coverity issues

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Migrate to Ubuntu 22.04 LTS release (supported through 2027) (#875)

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Updated documentation:
docs/workflow_interface.rst

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Updated

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Updated

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Updated documentation

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update workflow_interface.rst

Fixing typo

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
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* Added best model and last model extraction technique in docs/workflow_interface.rst

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added GPU for aggregator

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolving merge conflicts in 103 cyclic tutorial notebook

fixing FedAvg in workflow interface tutorials to be compatible with latest numpy stable release (1.24.3) (#833)

* fixing FedAvg averaging in order to be compatible with numpy v1.24+

Signed-off-by: kta-intel <kevin.ta@intel.com>

* uncommenting installations for consistency with other tutorials

Signed-off-by: kta-intel <kevin.ta@intel.com>

* fixing 301_MNIST_Watermarking tutorial FedAvg

Signed-off-by: kta-intel <kevin.ta@intel.com>

* fixing 301_MNIST_Watermarki
ng tutorial FedAvg

Signed-off-by: kta-intel <kevin.ta@intel.com>

* Switching to py38 kernel and clearing cell outputs

Signed-off-by: kta-intel <kevin.ta@intel.com>

---------

Signed-off-by: kta-intel <kevin.ta@intel.com>

---------

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolved merge conflicts in tests/github/experimental/testflow_datastore_cli.py

Testflow for verifying stdout redirection to Metaflow datastore (#758)

* implemented ray.wait

* reverted changes back after testing

* adding datastore cli test case

* removed unused variables

* removed stderr validation

* fixed lint suggestions

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added weighted_average aggregation function under openfl.experimental.interface.{keras,torch}.aggregation_funtions

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update EdenPipeline in the documentation (#877)

Signed-off-by: Amit Portnoy <1131991+amitport@users.noreply.github.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* WIP: CI Scans (#873)

* Initial scans commit for bandit, hadolint, trivy

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Address bandit scan results

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix Trivy action

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix linting

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add Coverity Badge

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update Hadolint threshold to flag errors only

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update Hadolint threshold to flag errors only

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update ROADMAP.md (#878)

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* initial commit

* add docstrings

* change importlib to import

* remove unnecesary files, replace ray with ray_grouped

* remove max concurency, add number of actors

* Trigger CI

* run tests

* lint changes

* flake

* changed number of actors to num_actors, added docs

* Fixed workflow API tests

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* lint fixes

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

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manuelhsantana pushed a commit that referenced this issue Jul 10, 2024
* Federated Runtime v1.0
experimental Aggregator and Collaborator in working condition

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added test, and mnist experimental workspaces working prototype

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Working on integration with Ishant's, and Keerti's code

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Second half of integration installment.

Remaning:
   Integration of data.yaml file.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Removing unnecessary directory my_federation.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* 1. Removed unncessart files.
2. Fix `fx plan freeze` command not working issue.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added function for test workspace

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added include_exclude testcase workspace.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Default execution workspace is mnist.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* data.yaml changes are integrated with this update.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Running a federation with GaNDLF Documentation (#794)

* Initial commit of Running the federation with GaNDLF Documentation

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update docs/running_the_federation_with_gandlf.rst

Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update README.md

Removed references to Intel's ownship, given it's now owned by the LF AI and Data.

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix Flake8 C419 for Ubuntu CI (#800)

C419 Unnecessary list comprehension passed to any()/all() prevents short-circuiting - rewrite as a generator

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update README.md

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix warnings and issues in docs (#825)

* Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

* fixup! Fix warnings and issues in docs

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>

---------

Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add Logo (#827)

* Add Logo

* Update README.md

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Change OpenFL documentation font to improve accessibility (#809)

This replaces the font of OpenFL documents with Intel One Mono font for low vision developers.

    Known issues:
    1. The text font within the images has not been changed.
    2. Some icons that do not exist in the new font cannot be displayed properly.

    Fixes securefederatedai#799

    Co-authored-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: He, Dan H <dan.h.he@intel.com>
    Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Co-authored-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update unit tests to improve code coverage (#821)

* Update ci config

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add unit test for following files

- openfl/federated/plan/plan.py
- openfl/interface/aggregation_functions/core/adaptive_aggregation.py

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add some test cases for databases module

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Fix bugs for databases module unittest

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Update unit tests for component module

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Restore workflow config and update some comments

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Enable save_ test case.
Add yaml under test dir for unit test usage.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove plan to new dir.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove plan to new dir.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add aggregator start test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 2 aggregator test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 1 aggregator test case.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Format code.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Refactor code.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add collaborator start test cases.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Add 1 collaborator test case.

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Format with flake8

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

* Remove TODO comments

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>

---------

Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>
Co-authored-by: Wang, Wenjie <wenjie2.wang@intel.com>
Co-authored-by: Lei5 Chen <lei5.chen@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add PyTorch linear regression example (#808)

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster.

    The model is defined by Pytorch which is able to run over both cpu (by default) and gpu. The dataset is generated by make_regression from sklearn.datasets with pre-defined parameters.

    Fixes #797

    Co-authored-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: He, Dan H <dan.h.he@intel.com>
    Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
    Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
    Signed-off-by: Wang, Le <le3.wang@intel.com>
    Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* This prints out the hash of the CSR to disk for both the aggregator and (#813)

* This prints out the hash of the CSR to disk for both the aggregator and
collaborator. The user then compares and approves this hash with the
hash printed out of the file to validate the CSR. In addition, a warning
message is pritned if certify is run in silent mode.

Fixes securefederatedai#692

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Refactor read_csr function to use get_csr_hash

Signed-off-by: Grant Baker <grant.baker@intel.com>

* Ask to check hashes before prompt

---------

Signed-off-by: Grant Baker <grant.baker@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Improve workspace requirements import (#810)

Remove the dump_requirement_file operation in export_ method.

            Fixes securefederatedai#767

            Co-authored-by: Li, Qingqing <qingqing.li@intel.com>
            Co-authored-by: Wu, Caili <caili.wu@intel.com>
            Signed-off-by: He, Dan H <dan.h.he@intel.com>
            Signed-off-by: Jiang, Jiaqiu <jiaqiu.jiang@intel.com>
            Signed-off-by: Li, Qingqing <qingqing.li@intel.com>
            Signed-off-by: Wang, Le <le3.wang@intel.com>
            Signed-off-by: Wu, Caili <caili.wu@intel.com>

Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Issue 506 Added Example using FedProx (#818)

* created new ineractive_api dir to hold pytorch fedprox mnist example

corrected files

changed to FedProxOptimizer and ran set_old_weights for new FedProx Pytorch example

renamed FedProx notebook

used mode.parrameters() to get pytorch model weights

got weights using state_dict

changed old wieghts to list (for serialization) and fixed README

input wieghts before zero_grad

[Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: #506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* [Enhancement: 506] Add an example that uses the FedProx optimizer in the interative_api

This duplicates the MedNIST_2D example in the interative api but changes it to use the FedProx optimizer.

Fixes: securefederatedai#506

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* Update README.md

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

* addressed comments by psfoley: corrected words in the jupyter notebook metadata and added a link to the FedProx paper in the README.

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* [Bug: 768] FX CLI: Separate create, cert gen commands (#807)

This change separates existing command
"fx collaborator.py generate-cert-request" command into two
commands.
"fx collaborator create -n {NAME} -d {DATA_PATH: optional}".
"fx collaborator generate-cert-request -n {NAME}".

Fixes #768

Signed-off-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Co-authored-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add new tutorial example to OpenFL interactive API (#812)

* Add new tutorial example to OpenFL interactive API

This adds a new tutorial example on distributing a linear regression task over OpenFL cluster

The model is defined by scikit-learn which is able to run over both cpu (by default) and gpu. The dataset is 1-dimensional noisy data of sinusoid with pre-defined parameters.

Fixes #798

Co-authored-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Grant Baker <grant.baker@intel.com>

Signed-off-by: Yi CAO <yi2.cao@intel.com>

* reduced requirements.txt in workspace

Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>

---------

Signed-off-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Co-authored-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>

* build(deps): bump tensorflow in /openfl-workspace/tf_cnn_histology (#776)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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* build(deps): bump tensorflow (#777)

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update GaNDLF repo location and test CI with master branch

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update GaNDLF repo location and test CI with master branch

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update GaNDLF repo location and test CI with master branch

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix documentation links. Change path names and templates for CI

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix paths

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix paths

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix breaking tests

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add compatible onnx version to requirements.txt file

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong csv file name

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong csv file name

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong names in workflow file

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix wrong data path

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix lint in test_gandlf.py

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix lint errors

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>
Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
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Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Signed-off-by: Yi CAO <yi2.cao@intel.com>
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Co-authored-by: akantak <aleksander.kantak@intel.com>
Co-authored-by: wangleflex <106506636+wangleflex@users.noreply.github.com>
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Co-authored-by: xiaoranf <desolatefang@gmail.com>
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Co-authored-by: Lei5 Chen <lei5.chen@intel.com>
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Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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* Fixed GaNDLF rst issues. Add sphinxcontrib-mermaid (#841)

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fix GaNDLF documentation links (#842)

* Fixed GaNDLF rst issues. Add sphinxcontrib-mermaid

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix links in GaNDLF Documentation

* Fixed GaNDLF rst issues. Add sphinxcontrib-mermaid

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix links in GaNDLF Documentation

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fix incorrectly formatted link in docs (#839)

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added licensing information to all experimental workspaces

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Made changes to LocalRuntime, and tested

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Rename collaborator_name variable to name in
experimental/component/collaborator/collaborator.py file.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump onnx in /openfl-workspace/gandlf_seg_test (#840)

Bumps [onnx](https://github.com/onnx/onnx) from 1.12 to 1.13.0.
- [Release notes](https://github.com/onnx/onnx/releases)
- [Changelog](https://github.com/onnx/onnx/blob/main/docs/Changelog.md)
- [Commits](https://github.com/onnx/onnx/compare/v1.12.0...v1.13.0)

---
updated-dependencies:
- dependency-name: onnx
  dependency-type: direct:production
...

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* Selected collaborators functionality added, test workspace of the same
is work-progress.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Selected collaborator testcases included with this commit.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Testcase private attributes workspace added with this commit.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Instead of remove private attributes from checkpoint, changed the value
to string "Private attributes: Not Available."

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added / Modified types of funciton arguments, and their return types.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Aggregator shutdown related changes are done in this commit

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update testflow_subset_of_collaborators.py

Updated subset of collaborators testcase

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified subset of collaborators testcase.

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Add files via upload

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Accessibility updates (#861)

* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes #848

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_nlp (#773)

* build(deps): bump tensorflow in /openfl-workspace/keras_nlp

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update RMSProp optimizer import

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* flake8

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_cnn_mnist (#771)

* build(deps): bump tensorflow in /openfl-workspace/keras_cnn_mnist

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>

* revert experimental Adam to legacy (#863)

Signed-off-by: kta-intel <kevin.ta@intel.com>

---------

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Signed-off-by: kta-intel <kevin.ta@intel.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Kevin Ta <116312994+kta-intel@users.noreply.github.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/keras_cnn_with_compression (#770)

* build(deps): bump tensorflow

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update Adam Optimizer import

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* build(deps): bump tensorflow from 2.9.3 to 2.11.1 in /openfl-tutorials/interactive_api/Flax_CNN_CIFAR (#775)

* build(deps): bump tensorflow

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.9.3 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.9.3...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

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* Fixed breaking backages

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add quiet flag back to pip install

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

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* build(deps): bump tensorflow-cpu from 2.8.4 to 2.11.1 in /openfl-workspace/keras_nlp_gramine_ready (#769)

* build(deps): bump tensorflow-cpu

Bumps [tensorflow-cpu](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow-cpu
  dependency-type: direct:production
...

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* Use legacy RMSprop optimizer

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

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Signed-off-by: Patrick Foley <psfoley@gmail.com>
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* Accessibility color contrast fixes (#864)

* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes #848

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Color contrast updates for accessibility

Color contrast updates for accessibility
- update generic `a` element
- update color of links in the toggle-able read-the-docs panel
- update the color of the text in search results
- update the color of notes headers

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
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* Testflow for verifying stdout redirection to Metaflow datastore (#758)

* implemented ray.wait

* reverted changes back after testing

* adding datastore cli test case

* removed unused variables

* removed stderr validation

* fixed lint suggestions

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
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* Tweak link color so it’s not so aggressive (#865)

Signed-off-by: Francis Storr <francis.storr@intel.com>
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* External Loop Functionality Added

External Loop Functionality Added

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* External Loop Functionality Added

External Loop Functionality Added

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* External Loop Functionality Added

External Loop Functionality Added

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
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* Added following tutorials, and testcase:
1. Vertical FL
2. Vertical FL Two Party
3. Internal Loop

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* plan.yaml modified in 301 watermarking, and subset of collaborators.

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* Modifying temp.sh for 2 collaborators.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
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* Update aggregator.py

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* FQDN switched to localhost

FQDN switched to localhost

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* While activating experimental OpenFL commands, install depedencies as well.

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* Install experimental requirements while activating experimental openfl commands.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
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* Update experimental-requirements.txt

Added ray 2.2.0 to experimental-requirements.txt file

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
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* Update requirements_workflow_interface.txt

Metaflow, and Ray dependencies are moved to openfl-workspace/experimental/experimental-requrirements.txt file.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
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* Delete openfl/experimental/utilities/utils.py, and removed torch depency from openfl/experimental/utilities/resources.py

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
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* Update requirements_workflow_interface.txt

Updated experimental tutorials requirements.txt file

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
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* Updating 201 GPUs tutorial

Updated Workflow_Interface_201_Exclusive_GPUs_with_Ray.ipynb for Aggregator, and Collaborator as stateful actor

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified 101, 102, 103, 301, 401 tutorials as per Aggregator, & Collaborator stateful collaborators

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
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* Excluding 'experimental' directory from workspace templates

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update 101 tutorial data.yaml

Updated 101 tutorials data.yaml to correct a mistake by in index parameter of private attribute function.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
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* Update resources.py

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified get_number_of_gpus function

Modify get_number_of_gpus function

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* This commit brings following changes:

1. Removed torch dependency from "get_number_of_gpus"
2. Added keras mnist example notebook
3. Added keras mnist workspace example
4. Removed openfl-workspace/experimental/experimental-requirements.txt
5. "fx aggregator start" command will install libraries from experimental tutorials requirements_workflow_interface.txt file
6. Added testcase_datastore_cli, testcase_reference and testcase_reference_with_include_exclude
7. Updated 101 torch mnist plan.yaml and data.yaml
8. Removed aggregator start flow thread from cli/aggregator.py
9. At last changes made in federated runtime

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* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /tests/github/interactive_api_director/experiments/tensorflow_mnist/envoy (#772)

* build(deps): bump tensorflow

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>

* Update sd_requirements.txt

* revert to legacy SGD and install tensorflow==2.11 for workflow

Signed-off-by: kta-intel <kevin.ta@intel.com>

---------

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Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
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* build(deps): bump tensorflow from 2.8.4 to 2.11.1 in /openfl-workspace/tf_2dunet (#774)

* build(deps): bump tensorflow in /openfl-workspace/tf_2dunet

Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 2.8.4 to 2.11.1.
- [Release notes](https://github.com/tensorflow/tensorflow/releases)
- [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md)
- [Commits](https://github.com/tensorflow/tensorflow/compare/v2.8.4...v2.11.1)

---
updated-dependencies:
- dependency-name: tensorflow
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>

* Update requirements.txt

to retrigger CI

* Update requirements.txt

---------

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* This commit brings following changes:
1. Renamed Workflow_Interface_101_Keras_MNIST_with_GPU.ipynb to Workflow_Interface_104_Keras_MNIST_with_GPU.ipynb
2. Updated documentation in Workflow_Interface_104_Keras_MNIST_with_GPU.ipynb
3. protobuf bumped from 3.19.6 to 3.20.0 in setup.py
4. Incorporating review comments (WIP)

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified 104 Keras MNIST tutorial

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* This comming brings following changes:
1. Experimental Aggregator workflow testcases moved to test/github/experimental/workspace directory
2. Added dependecy related changes

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Removing unnecessary logs

Removing unnecessary logs

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update collaborator.py

Removing unnecessary logs

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Avoided deep copying the context by removing private attributes from context before checkpoint

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Incoporated review comments

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added dependecies to each tutorial notebooks

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* pinned tensorboardX (#870)

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* While taking aggregator step remove private attributes before taking checkpoint and set it back to ctx after checkpoint

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Removing unnecessary deepcopies from aggregator.py file

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Removing unnecessary comments

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update stream_redirect.py

Removing unnecessary imports

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added color escape sequences to datastore cli localruntime and workspace testcases

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update requirements_privacy_meter.txt

torch 1.13.1 requires torchvision 0.14.1 not 0.14.0

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update Workflow_Interface_VFL_Two_Party

Added actor related changed to Workflow_Interface_VFL_Two_Party

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Files added required to test experimental aggregator based workflow by GitHUB actions

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update Workflow_Interface_104_Keras_MNIST_with_GPU.ipynb

Removing GPU parameter from collaborator decorator.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update resources.py

Updated get_number_of_gpus function

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Updating import statement

In 104 keras workspace utils.py updating import SummaryWriter statement from torch to tensorflow

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* With this commit path of template can be explicitely given, user does not have to
choose from available example templates. Only applicable to experimental openfl.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fixed flake8 issues and typos

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolved flake8 issues,
Added warning statements when data.yaml is not found or aggregator / collaborator private attributes are not found in data.yaml,
Tested by running all tutorials and tests

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Moving the logs after data.yaml warning, and removing unnecessary blank lines.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Adding N-level arguments functionality

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update workflow_interface.rst

Added section on how to save best and last model from Metaflow CLI

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolving last few TODO items.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Updated logs to provide exact information to user.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* This commit brings following updates:
1. Remove unnecessary spaces from Workflow_Interface_102_Aggregator_Validation.ipynb
2. Upgraded protobuf to 3.20.3 in setup.py as per tensorboard requirements
3. Modified 101-torch-cnn-mnist workspace for n-level arguments
4. Added a federated runtime workspace for 102-aggregator-validation

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* This commit brings following changes:
1. Added 501_pytorch_tinyimagenet_transfer_learning workspace for experimental workflow interface
2. Removed `feature_shape` from openfl/experimental/interface/cli/plan.py
3. Resolved flake8 errors in openfl-workspace/experimental directory

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update data.yaml

Correcting a mistake train dataset assigned to test and vice versa.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update flow.py

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update flow.py

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Adding functionality to convert jupyter notebook to workspace (in progress)

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Write flow.py, collaborator_private_attrs.py and aggregator_private_attrs.py automatically

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Find aggregator, and collaborator arguments

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modifying arguments help

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Removed automatically generated Zone.Identifier file
Added Approach2 notebook
Modified creator.py

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* workspace_creator renamed to workspace_builder
finding values without help of any tags

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Finished exporting data.yaml, plan.yaml.
Workspace creator validated for 101 MNIST and 301 Watermarking with MNIST

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Removing round number constant argument from 301 MNIST WATERMARKING

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* * Created get_collaborator_kwargs function in localruntime class which takes collaborator name as argument and returns name of private attributes function and arguments required to call it.
* Changed workspace builder code used get_collaborator_kwargs function to build data.yaml file.

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified get_collaborator_args function

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified workspace_builder/build.py file to resolve a typo

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Removed unnecessary files from template_workspace directory
Moved print_tree to after generating python script

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added documentation and inline comments for workspace_builder

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added libraries required by WorkspaceBuilder

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update Tensorflow, gRPC, Protobuf dependencies (#868)

* Update Tensorflow to latest, finally update grpcio/protobuf

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Lint issue fix and missing tf reference

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* pyzmq version fixed

* fix taskrunner tests for windows

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* fix taskrunner test syntax for windows

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* adding user option to workspace pip install requirements for windows

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* fix windows CI test

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* testing virtual env for windows github actions

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* testing virtual env for windows github actions

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* testing virtual env for windows github actions

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* testing venv for windows

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* test venv for windows

* test venv for windows

* Added new KerasSerializer. Fixed other Interactive API experiments

* Update taskrunner.yml

* Update taskrunner.yml

* Update workspace.py

* Update workspace.py

* Update taskrunner.yml

* Remove get_model import from global namespace so dependencies are not loaded into memory unnecessarily (breaking windows build)

* Refactoring and cleaning up imports to support Windows install

* Fixed logger import paths

* Fix missing imports

* Fix native import

* Fix lint errors

* Fix keras optimizer patch. Remove irrelevant unit test

* Format logs in UTF-8 for windows

* Update interactive-kvasir.yml

* Consolidate github actions python versions to single file

* Update python versions

* Update python versions

* Update python versions

* Reduce # of DataLoader workers for Pytorch Kvasir CI test

* Fix Windows encoding

* Fix Windows encoding and limit rounds so Github Actions CI doesn't run out of memory

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix windows encoding

* Fix Windows encoding

---------

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Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>
Co-authored-by: Mansi Sharma <77758170+mansishr@users.noreply.github.com>
Co-authored-by: Mansi Sharma <mansi.sharma@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Add FL plan description to documentation (#872)

* Add plan description to documentation

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* fix indentation

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* Apply suggestions from code review

Co-authored-by: Patrick Foley <patrick.foley@intel.com>

---------

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>
Co-authored-by: Patrick Foley <patrick.foley@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolve Coverity Issues (#874)

* Fix coverity issues

* Resolve remaining coverity issues

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Migrate to Ubuntu 22.04 LTS release (supported through 2027) (#875)

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fixed flake8 issues

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fixed flake8 issues in test/experimental directory

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Accessibility updates (#861)

* Fix incorrectly formatted link in docs

Signed-off-by: Francis Storr <francis.storr@intel.com>

* Font styling, color contrast, other accessibility updates

This update:
1. Restores Roboto and Lato fonts for most body copy, leaving Intel One Mono for code samples.
2. Adds colors (in `colors.css`)
3. Adds a new `accessibility_overrides.css` file containing CSS that improves the accessibility of the documentation and, where possible, Read The Docs. These updates remediate numerous non-conforming WCAG 2.x Level AA bugs. The use of a separate file for this hopefully makes these changes easier to manage and less likely to be accessibility overwritten in the future.

Closes #848

Signed-off-by: Francis Storr <francis.storr@intel.com>

---------

Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* fixing FedAvg in workflow interface tutorials to be compatible with latest numpy stable release (1.24.3) (#833)

* fixing FedAvg averaging in order to be compatible with numpy v1.24+

Signed-off-by: kta-intel <kevin.ta@intel.com>

* uncommenting installations for consistency with other tutorials

Signed-off-by: kta-intel <kevin.ta@intel.com>

* fixing 301_MNIST_Watermarking tutorial FedAvg

Signed-off-by: kta-intel <kevin.ta@intel.com>

* fixing 301_MNIST_Watermarki
ng tutorial FedAvg

Signed-off-by: kta-intel <kevin.ta@intel.com>

* Switching to py38 kernel and clearing cell outputs

Signed-off-by: kta-intel <kevin.ta@intel.com>

---------

Signed-off-by: kta-intel <kevin.ta@intel.com>
Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Testflow for verifying stdout redirection to Metaflow datastore (#758)

* implemented ray.wait

* reverted changes back after testing

* adding datastore cli test case

* removed unused variables

* removed stderr validation

* fixed lint suggestions

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolving DCO issue

fixing FedAvg in workflow interface tutorials to be compatible with latest numpy stable release (1.24.3) (#833)

* fixing FedAvg averaging in order to be compatible with numpy v1.24+

Signed-off-by: kta-intel <kevin.ta@intel.com>

* uncommenting installations for consistency with other tutorials

Signed-off-by: kta-intel <kevin.ta@intel.com>

* fixing 301_MNIST_Watermarking tutorial FedAvg

Signed-off-by: kta-intel <kevin.ta@intel.com>

* fixing 301_MNIST_Watermarki
ng tutorial FedAvg

Signed-off-by: kta-intel <kevin.ta@intel.com>

* Switching to py38 kernel and clearing cell outputs

Signed-off-by: kta-intel <kevin.ta@intel.com>

---------

Signed-off-by: kta-intel <kevin.ta@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update EdenPipeline in the documentation (#877)

Signed-off-by: Amit Portnoy <1131991+amitport@users.noreply.github.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fixed flake8 issues

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Added weighted_average aggregation function under openfl.experimental.interface.{keras,torch}.aggregation_funtions

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Tested all local-runtime & federated-runtime tutorials and testcases

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Resolving merge conflicts in experimental local-runtme tutorials 101, 103, 201, & 301

fixing FedAvg in workflow interface tutorials to be compatible with latest numpy stable release (1.24.3) (#833)

* fixing FedAvg averaging in order to be compatible with numpy v1.24+

Signed-off-by: kta-intel <kevin.ta@intel.com>

* uncommenting installations for consistency with other tutorials

Signed-off-by: kta-intel <kevin.ta@intel.com>

* fixing 301_MNIST_Watermarking tutorial FedAvg

Signed-off-by: kta-intel <kevin.ta@intel.com>

* fixing 301_MNIST_Watermarki
ng tutorial FedAvg

Signed-off-by: kta-intel <kevin.ta@intel.com>

* Switching to py38 kernel and clearing cell outputs

Signed-off-by: kta-intel <kevin.ta@intel.com>

---------

Signed-off-by: kta-intel <kevin.ta@intel.com>

---------

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* WIP: CI Scans (#873)

* Initial scans commit for bandit, hadolint, trivy

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Address bandit scan results

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix Trivy action

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix linting

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Add Coverity Badge

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update Hadolint threshold to flag errors only

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Update Hadolint threshold to flag errors only

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Update ROADMAP.md (#878)

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* This commit brings following changes:
1. Renaming workspace_builder module to workspace_export.
2. WorkspaceBuilder class renamed to WorkspaceExport.
3. Added WorkspaceExport.export function for user which wraps generate_requirements, generate_plan_yaml, generate_data_yaml functions.
4. Merged WorkspaceExport module to `fx workspace create` command by adding new following arguments:
    - `--notebook` Path to jupyter notebook
    - `--template_workspace_dir` Output path for generated workspace
5. WorkspaceExport removed from 101, and 103 tutorials.
6. setup.py changed accordingly.

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* This commit brings following changes:
1. output_dir renamed to output_workspace also the user must pass this parameter
 (default=/tmp is now removed) or there will be an error.
2. template_workspace_path is not required anymore.
3. Added a new tutorials Workflow_Interface_1001_Workspace_Creation_from_JupyterNotebook.ipynb
 (copy of Workflow_Interface_301_MNIST_Watermarking.ipynb) explaining how to use WorkspaceExport.

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* In Workflow_Interface_1001 tutorial list of collaborator are changed to 5 from 2

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Uncommeted pip install libraries

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Adding GPU for aggregator in 201, Global DP & Privacy Meter tutorials

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modifed documentation in 1001 tutorial

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Modified documentation in 1001 tutorial

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* Fixing 'param' attribute not found issue. in 301, 1001 experimental tutrials and 301
mnist watermarking workspace.

Sol.
imagen library installs param depedency latest version
and param package got an upgrde recently. Pinned param to 1.13.0
after installing imagen which fixed the issue.

Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>

* VFL 2 party example

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* participant names to lowercase and changes to instructions

Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>

* Resolving missing packages from watermarking examples that break python 3.9+. Fix linting, spelling. Remove experimental aggregation functions

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Remove duplicate files in openfl.experimental

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Trigger CI

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Moving test to be conditional

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix inconsistent use of enumerate in loops

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fixing tests

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Accomodate conversion of names to lower case

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Missing torchvision dependency in tests

Signed-off-by: Patrick Foley <psfoley@gmail.com>

* Fix lint issues

Signed-off-by: Patrick Foley <psfoley@gmail.com>

---------

Signed-off-by: Parth Mandaliya <parthx.mandaliya@intel.com>
Signed-off-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
Signed-off-by: Patrick Foley <psfoley@gmail.com>
Signed-off-by: Aleksander Kantak <aleksander.kantak@intel.com>
Signed-off-by: He, Dan H <dan.h.he@intel.com>
Signed-off-by: Fang, Xiaoran <xiaoran.fang@intel.com>
Signed-off-by: Klemme, Beverly <beverly.klemme@intel.com>
Signed-off-by: Baker, Grant <grant.baker@intel.com>
Signed-off-by: ELizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Jillela, Emmanuel <emmanuel.jillela@intel.com>
Signed-off-by: Beverly Klemme <beverly.klemme@intel.com>
Signed-off-by: Elizabeth Simon, Neethu <neethu.elizabeth.simon@intel.com>
Signed-off-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Signed-off-by: Yi CAO <yi2.cao@intel.com>
Signed-off-by: Francis Storr <francis.storr@intel.com>
Signed-off-by: dependabot[bot] <support@github.com>
Signed-off-by: kta-intel <kevin.ta@intel.com>
Signed-off-by: Mansi Sharma <mansi.sharma@intel.com>
Signed-off-by: Amit Portnoy <1131991+amitport@users.noreply.github.com>
Co-authored-by: Patrick Foley <patrick.foley@intel.com>
Co-authored-by: Sarthak Pati <sarthak.pati@pennmedicine.upenn.edu>
Co-authored-by: Prashant Shah <40899779+SprashAI@users.noreply.github.com>
Co-authored-by: akantak <aleksander.kantak@intel.com>
Co-authored-by: wangleflex <106506636+wangleflex@users.noreply.github.com>
Co-authored-by: He, Dan H <dan.h.he@intel.com>
Co-authored-by: xiaoranf <desolatefang@gmail.com>
Co-authored-by: Wang, Wenjie <wenjie2.wang@intel.com>
Co-authored-by: Lei5 Chen <lei5.chen@intel.com>
Co-authored-by: Beverly Klemme <35578090+bjklemme-intel@users.noreply.github.com>
Co-authored-by: Emmanuel Jillela <emmanuel.jillela@intel.com>
Co-authored-by: Yi CAO <yi2.cao@intel.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Francis Storr <francis.storr@intel.com>
Co-authored-by: Patrick Foley <psfoley@gmail.com>
Co-authored-by: Kevin Ta <116312994+kta-intel@users.noreply.github.com>
Co-authored-by: Keerti Prakash Talwar <115972088+KeertiX@users.noreply.github.com>
Co-authored-by: kta-intel <kevin.ta@intel.com>
Co-authored-by: porteratzo <44075849+porteratzo@users.noreply.github.com>
Co-authored-by: Parth Mandaliya <parth.mandaliya.007@gmail.com>
Co-authored-by: Mansi Sharma <77758170+mansishr@users.noreply.github.com>
Co-authored-by: Mansi Sharma <mansi.sharma@intel.com>
Co-authored-by: Amit Portnoy <1131991+amitport@users.noreply.github.com>
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