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name: Generate Docs | ||
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on: | ||
push: | ||
branches: | ||
- main | ||
paths: | ||
- 'notebooks/**' | ||
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jobs: | ||
convert-and-publish: | ||
runs-on: ubuntu-latest | ||
steps: | ||
- uses: actions/checkout@v2 | ||
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- name: Set up Python | ||
uses: actions/setup-python@v2 | ||
with: | ||
python-version: '3.x' | ||
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- name: Install dependencies | ||
run: | | ||
python -m pip install --upgrade pip | ||
pip install -r requirements.txt | ||
- name: Convert notebooks to markdown | ||
run: | | ||
for notebook in notebooks/*.ipynb; do | ||
jupyter nbconvert --to markdown "$notebook" --output-dir docs/ | ||
done | ||
- name: Update index page | ||
run: | | ||
echo "## Available Documentation:" >> docs/index.md | ||
echo "" >> docs/index.md | ||
for file in docs/*.md; do | ||
if [ "$(basename "$file")" != "index.md" ]; then | ||
echo "- [$(basename "$file" .md)]($(basename "$file"))" >> docs/index.md | ||
fi | ||
done | ||
- name: Commit and push changes | ||
run: | | ||
git config --local user.email "action@github.com" | ||
git config --local user.name "GitHub Action" | ||
git add docs | ||
git commit -m "Update documentation" || echo "No changes to commit" | ||
git push |
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title: notebook_docs | ||
description: a repo to demonstrate how to create GitHub pages documentation from Jupyter notebooks | ||
theme: jekyll-theme-cayman |
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--- | ||
layout: default | ||
title: Home | ||
--- | ||
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## Welcome to Notebook Documentation | ||
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This site contains documentation for our jupyter notebooks. | ||
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## Available Documentation | ||
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(This list will be automatically populated) |
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{ | ||
"cells": [ | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"# Import cleaning process\n", | ||
"\n", | ||
"The following notebook is part of our import cleaning process.\n", | ||
"This notebook accomplishes the following:\n", | ||
"- Imports a CSV file\n", | ||
"- Removes extra columns\n", | ||
"- Converts strings to correct data types\n", | ||
"- Saves in the cleansed directory" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": null, | ||
"metadata": {}, | ||
"outputs": [], | ||
"source": [ | ||
"# Pip install\n", | ||
"%pip install pandas\n", | ||
"\n", | ||
"# Here we would import libraries\n", | ||
"import sys\n", | ||
"import pandas as pd\n" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"## Import file from raw data folder\n", | ||
"Here we import the file from the raw folder" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": null, | ||
"metadata": {}, | ||
"outputs": [], | ||
"source": [ | ||
"# Pseudo code for opening a file, importing a CSV, and loading it into pandas\n", | ||
"\n", | ||
"# Define the file path\n", | ||
"file_path = 'path/to/your/csvfile.csv'\n", | ||
"\n", | ||
"# Use pandas to read the CSV file\n", | ||
"df = pd.read_csv(file_path)\n", | ||
"\n", | ||
"# Display the first few rows of the dataframe\n", | ||
"print(df.head())" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"## Removes extra columns\n", | ||
"Removing the address and phone fields" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": null, | ||
"metadata": {}, | ||
"outputs": [], | ||
"source": [ | ||
"# BEGIN: Remove extra columns\n", | ||
"\n", | ||
"# List of columns to remove\n", | ||
"columns_to_remove = ['address', 'phone']\n", | ||
"\n", | ||
"# Remove the specified columns\n", | ||
"df_cleaned = df.drop(columns=columns_to_remove)\n", | ||
"\n", | ||
"# Display the first few rows of the cleaned dataframe\n", | ||
"print(df_cleaned.head())\n", | ||
"\n", | ||
"# END: Remove extra columns" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"## Set data types\n", | ||
"Sets the correct datatypes for date and identity fields." | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": null, | ||
"metadata": {}, | ||
"outputs": [], | ||
"source": [ | ||
"# Pseudo code for setting data types\n", | ||
"\n", | ||
"# Convert the 'date_field' to datetime\n", | ||
"df_cleaned['date_field'] = pd.to_datetime(df_cleaned['date_field'])\n", | ||
"\n", | ||
"# Convert the 'identity_field' to numeric (integer)\n", | ||
"df_cleaned['identity_field'] = pd.to_numeric(df_cleaned['identity_field'], errors='coerce')\n", | ||
"\n", | ||
"# Display the data types of the dataframe to verify changes\n", | ||
"print(df_cleaned.dtypes)" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"## Save new data to a cleansed directory\n", | ||
"Write the cleansed data from Pandas to a new CSV file in the cleansed folder" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": null, | ||
"metadata": {}, | ||
"outputs": [], | ||
"source": [ | ||
"# Pseudo code to write the cleansed data to a new CSV file in the cleansed folder\n", | ||
"\n", | ||
"# Define the output file path\n", | ||
"output_file_path = 'path/to/cleansed/folder/cleansed_data.csv'\n", | ||
"\n", | ||
"# Use pandas to write the dataframe to a CSV file\n", | ||
"df_cleaned.to_csv(output_file_path, index=False)\n", | ||
"\n", | ||
"# Confirm the file has been written\n", | ||
"print(f\"Cleansed data has been written to {output_file_path}\")" | ||
] | ||
} | ||
], | ||
"metadata": { | ||
"kernelspec": { | ||
"display_name": ".venv", | ||
"language": "python", | ||
"name": "python3" | ||
}, | ||
"language_info": { | ||
"name": "python", | ||
"version": "3.12.1" | ||
} | ||
}, | ||
"nbformat": 4, | ||
"nbformat_minor": 2 | ||
} |
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nbconvert | ||
jupyter |