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rename/unify the long flag --out-prefix to --out-file.
kmcp profile:
fix the number of reads belonging to references in the profile when no matches are found, which should be 0 instead of 1.
new command:
kmcp utils index-density: plotting the element density of bloom filters for an index file.
An audience was concerned about it, but the results showed the elements (1s) are uniformly distributed in all BFs.