add jekyll target blank plugin (alshedivat#404)

* add jekyll target blank * Remove manual target blank from everywhere * Update README.md * Set ruby version to 3.0.2 in the deploy script Co-authored-by: Maruan Al-Shedivat <maruan@genesistherapeutics.ai>
siantonelli · Oct 26, 2024 · 27ea2e3 · 27ea2e3
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diff --git a/Gemfile b/Gemfile
@@ -16,7 +16,6 @@ group :jekyll_plugins do
     gem 'jekyll-sitemap'
     gem 'jekyll-toc'
     gem 'jekyll-twitter-plugin'
-    gem 'jekyll-sitemap'
     gem 'jemoji'
     gem 'mini_racer'
     gem 'unicode_utils'

diff --git a/README.md b/README.md
@@ -457,7 +457,10 @@ $ bundle exec jekyll serve
 ```
 
 Now, feel free to customize the theme however you like (don't forget to change the name!).
-After you are done, **commit** your final changes.
+
+**Important:**
+- Make sure to change `url` field in `_config.yml` to `<your-github-username>.github.io`.
+- After you are done, **commit** your final changes.
 
 #### Deployment
 

diff --git a/_config.yml b/_config.yml
@@ -243,7 +243,6 @@ plugins:
   - jekyll-sitemap
   - jekyll-toc
   - jekyll-twitter-plugin
-  - jekyll-sitemap
   - jemoji
   - jekyll-figure
 

diff --git a/_includes/social.html b/_includes/social.html
@@ -12,11 +12,11 @@
 {% endif %}
 {%- if site.scholar_userid -%}
 <a href="https://scholar.google.com/citations?user={{ site.scholar_userid }}" title="Google Scholar"><i
-                class="ai ai-google-scholar"></i></a>
+        class="ai ai-google-scholar"></i></a>
 {% endif %}
 {%- if site.semanticscholar_id -%}
 <a href="https://www.semanticscholar.org/author/{{ site.semanticscholar_id }}" title="Semantic Scholar"><i
-                class="ai ai-semantic-scholar"></i></a>
+        class="ai ai-semantic-scholar"></i></a>
 {% endif %}
 {%- if site.publons_id -%}
 <a href="https://publons.com/a/{{ site.publons_id }}/" title="Publons"><i class="ai ai-publons"></i></a>
@@ -29,11 +29,11 @@
 {% endif %}
 {%- if site.research_gate_profile -%}
 <a href="https://www.researchgate.net/profile/{{site.research_gate_profile}}/" title="ResearchGate"><i
-                class="ai ai-researchgate"></i></a>
+        class="ai ai-researchgate"></i></a>
 {% endif %}
 {%- if site.scopus_id -%}
 <a href="https://www.scopus.com/authid/detail.uri?authorId={{site.scopus_id}}" title="Scopus"><i
-                class="ai ai-scopus"></i></a>
+        class="ai ai-scopus"></i></a>
 {% endif %}
 {%- if site.github_username -%}
 <a href="https://github.com/{{ site.github_username }}" title="GitHub"><i class="fab fa-github"></i></a>
@@ -64,7 +64,7 @@
 {% endif %}
 {%- if site.wikipedia_id -%}
 <a href="https://wikipedia.org/wiki/User:{{ site.wikipedia_id }}" title="Wikipedia"><i
-                class="fab fa-wikipedia-w"></i></a>
+        class="fab fa-wikipedia-w"></i></a>
 {% endif %}
 {%- if site.strava_userid -%}
 <a href="https://www.strava.com/athletes/{{ site.strava_userid }}" title="Strava"><i class="fab fa-strava"></i></a>
@@ -80,7 +80,7 @@
 {% endif %}
 {%- if site.stackoverflow_id -%}
 <a href="https://stackoverflow.com/users/{{ site.stackoverflow_id }}" title="Stackoverflow"><i
-                class="fab fa-stack-overflow"></i></a>
+        class="fab fa-stack-overflow"></i></a>
 {% endif %}
 {%- if site.kaggle_id -%}
 <a href="https://www.kaggle.com/{{ site.kaggle_id }}" title="Kaggle"><i class="fab fa-kaggle"></i></a>

diff --git a/_news/announcement_2.md b/_news/announcement_2.md
@@ -9,7 +9,7 @@ Announcements and news can be much longer than just quick inline posts. In fact,
 
 ***
 
-Jean shorts raw denim Vice normcore, art party High Life PBR skateboard stumptown vinyl kitsch. Four loko meh 8-bit, tousled banh mi tilde forage Schlitz dreamcatcher twee 3 wolf moon. Chambray asymmetrical paleo salvia, sartorial umami four loko master cleanse drinking vinegar brunch. <a href="https://www.pinterest.com" target="blank">Pinterest</a> DIY authentic Schlitz, hoodie Intelligentsia butcher trust fund brunch shabby chic Kickstarter forage flexitarian. Direct trade <a href="https://en.wikipedia.org/wiki/Cold-pressed_juice" target="blank">cold-pressed</a> meggings stumptown plaid, pop-up taxidermy. Hoodie XOXO fingerstache scenester Echo Park. Plaid ugh Wes Anderson, freegan pug selvage fanny pack leggings pickled food truck DIY irony Banksy.
+Jean shorts raw denim Vice normcore, art party High Life PBR skateboard stumptown vinyl kitsch. Four loko meh 8-bit, tousled banh mi tilde forage Schlitz dreamcatcher twee 3 wolf moon. Chambray asymmetrical paleo salvia, sartorial umami four loko master cleanse drinking vinegar brunch. <a href="https://www.pinterest.com">Pinterest</a> DIY authentic Schlitz, hoodie Intelligentsia butcher trust fund brunch shabby chic Kickstarter forage flexitarian. Direct trade <a href="https://en.wikipedia.org/wiki/Cold-pressed_juice">cold-pressed</a> meggings stumptown plaid, pop-up taxidermy. Hoodie XOXO fingerstache scenester Echo Park. Plaid ugh Wes Anderson, freegan pug selvage fanny pack leggings pickled food truck DIY irony Banksy.
 
 #### Hipster list
 <ul>

diff --git a/_posts/2015-03-15-formatting-and-links.md b/_posts/2015-03-15-formatting-and-links.md
@@ -4,7 +4,7 @@ title:  a post with formatting and links
 date:   2015-03-15 16:40:16
 description: march & april, looking forward to summer
 ---
-Jean shorts raw denim Vice normcore, art party High Life PBR skateboard stumptown vinyl kitsch. Four loko meh 8-bit, tousled banh mi tilde forage Schlitz dreamcatcher twee 3 wolf moon. Chambray asymmetrical paleo salvia, sartorial umami four loko master cleanse drinking vinegar brunch. <a href="https://www.pinterest.com" target="blank">Pinterest</a> DIY authentic Schlitz, hoodie Intelligentsia butcher trust fund brunch shabby chic Kickstarter forage flexitarian. Direct trade <a href="https://en.wikipedia.org/wiki/Cold-pressed_juice" target="blank">cold-pressed</a> meggings stumptown plaid, pop-up taxidermy. Hoodie XOXO fingerstache scenester Echo Park. Plaid ugh Wes Anderson, freegan pug selvage fanny pack leggings pickled food truck DIY irony Banksy.
+Jean shorts raw denim Vice normcore, art party High Life PBR skateboard stumptown vinyl kitsch. Four loko meh 8-bit, tousled banh mi tilde forage Schlitz dreamcatcher twee 3 wolf moon. Chambray asymmetrical paleo salvia, sartorial umami four loko master cleanse drinking vinegar brunch. <a href="https://www.pinterest.com">Pinterest</a> DIY authentic Schlitz, hoodie Intelligentsia butcher trust fund brunch shabby chic Kickstarter forage flexitarian. Direct trade <a href="https://en.wikipedia.org/wiki/Cold-pressed_juice">cold-pressed</a> meggings stumptown plaid, pop-up taxidermy. Hoodie XOXO fingerstache scenester Echo Park. Plaid ugh Wes Anderson, freegan pug selvage fanny pack leggings pickled food truck DIY irony Banksy.
 
 #### Hipster list
 <ul>

diff --git a/_posts/2015-10-20-math.md b/_posts/2015-10-20-math.md
@@ -4,7 +4,7 @@ title: a post with math
 date: 2015-10-20 11:12:00-0400
 description: an example of a blog post with some math
 ---
-This theme supports rendering beautiful math in inline and display modes using [MathJax 3](https://www.mathjax.org/){:target="\_blank"} engine. You just need to surround your math expression with `$$`, like `$$ E = mc^2 $$`. If you leave it inside a paragraph, it will produce an inline expression, just like $$ E = mc^2 $$.
+This theme supports rendering beautiful math in inline and display modes using [MathJax 3](https://www.mathjax.org/) engine. You just need to surround your math expression with `$$`, like `$$ E = mc^2 $$`. If you leave it inside a paragraph, it will produce an inline expression, just like $$ E = mc^2 $$.
 
 To use display mode, again surround your expression with `$$` and place it as a separate paragraph. Here is an example:
 
@@ -22,4 +22,4 @@ MathJax will automatically number equations:
 
 and by adding `\label{...}` inside the equation environment, we can now refer to the equation using `\eqref`.
 
-Note that MathJax 3 is [a major re-write of MathJax](https://docs.mathjax.org/en/latest/upgrading/whats-new-3.0.html){:target="\_blank"} that brought a significant improvement to the loading and rendering speed, which is now [on par with KaTeX](http://www.intmath.com/cg5/katex-mathjax-comparison.php){:target="\_blank"}.
+Note that MathJax 3 is [a major re-write of MathJax](https://docs.mathjax.org/en/latest/upgrading/whats-new-3.0.html) that brought a significant improvement to the loading and rendering speed, which is now [on par with KaTeX](http://www.intmath.com/cg5/katex-mathjax-comparison.php).
diff --git a/_posts/2018-12-22-distill.md b/_posts/2018-12-22-distill.md
@@ -47,7 +47,7 @@ If you are interested in correctly adding dark mode support for distill, please
 
 ## Equations
 
-This theme supports rendering beautiful math in inline and display modes using [MathJax 3](https://www.mathjax.org/){:target="\_blank"} engine.
+This theme supports rendering beautiful math in inline and display modes using [MathJax 3](https://www.mathjax.org/) engine.
 You just need to surround your math expression with `$$`, like `$$ E = mc^2 $$`.
 If you leave it inside a paragraph, it will produce an inline expression, just like $$ E = mc^2 $$.
 
@@ -58,7 +58,7 @@ $$
 \left( \sum_{k=1}^n a_k b_k \right)^2 \leq \left( \sum_{k=1}^n a_k^2 \right) \left( \sum_{k=1}^n b_k^2 \right)
 $$
 
-Note that MathJax 3 is [a major re-write of MathJax](https://docs.mathjax.org/en/latest/upgrading/whats-new-3.0.html){:target="\_blank"} that brought a significant improvement to the loading and rendering speed, which is now [on par with KaTeX](http://www.intmath.com/cg5/katex-mathjax-comparison.php){:target="\_blank"}.
+Note that MathJax 3 is [a major re-write of MathJax](https://docs.mathjax.org/en/latest/upgrading/whats-new-3.0.html) that brought a significant improvement to the loading and rendering speed, which is now [on par with KaTeX](http://www.intmath.com/cg5/katex-mathjax-comparison.php).
 
 
 ***

diff --git a/_posts/2020-09-28-github-metadata.md b/_posts/2020-09-28-github-metadata.md
@@ -19,7 +19,7 @@ A sample blog page that demonstrates the accessing of github meta data.
 
 ## Additional Reading
 * If you're recieving incorrect/missing data, you may need to perform a Github API<a href="https://github.com/jekyll/github-metadata/blob/master/docs/authentication.md"> authentication</a>.
-* Go through this <a href="https://jekyll.github.io/github-metadata/" target="blank">README</a> for more details on the topic.
+* Go through this <a href="https://jekyll.github.io/github-metadata/">README</a> for more details on the topic.
 * <a href= "https://github.com/jekyll/github-metadata/blob/master/docs/site.github.md">This page</a> highlights all the feilds you can access with github-metadata.
 <br />
 

diff --git a/_posts/2020-09-28-twitter.md b/_posts/2020-09-28-twitter.md
@@ -15,4 +15,4 @@ An example of pulling from a timeline:
 {% twitter https://twitter.com/jekyllrb maxwidth=500 limit=3 %}
 
 # Additional Details
-For more details on using the plugin visit: [jekyll-twitter-plugin](https://github.com/rob-murray/jekyll-twitter-plugin){:target="\_blank"}
+For more details on using the plugin visit: [jekyll-twitter-plugin](https://github.com/rob-murray/jekyll-twitter-plugin)
diff --git a/_projects/1_project.markdown → _projects/1_project.md b/_projects/1_project.markdown → _projects/1_project.md
@@ -62,7 +62,7 @@ You describe how you toiled, sweated, *bled* for your project, and then... you r
 
 
 The code is simple.
-Just wrap your images with `<div class="col-sm">` and place them inside `<div class="row">` (read more about the <a href="https://getbootstrap.com/docs/4.4/layout/grid/" target="_blank">Bootstrap Grid</a> system).
+Just wrap your images with `<div class="col-sm">` and place them inside `<div class="row">` (read more about the <a href="https://getbootstrap.com/docs/4.4/layout/grid/">Bootstrap Grid</a> system).
 To make images responsive, add `img-fluid` class to each; for rounded corners and shadows use `rounded` and `z-depth-1` classes.
 Here's the code for the last row of images above:
 

diff --git a/_projects/2_project.markdown → _projects/2_project.md b/_projects/2_project.markdown → _projects/2_project.md
@@ -62,7 +62,7 @@ You describe how you toiled, sweated, *bled* for your project, and then... you r
 
 
 The code is simple.
-Just wrap your images with `<div class="col-sm">` and place them inside `<div class="row">` (read more about the <a href="https://getbootstrap.com/docs/4.4/layout/grid/" target="_blank">Bootstrap Grid</a> system).
+Just wrap your images with `<div class="col-sm">` and place them inside `<div class="row">` (read more about the <a href="https://getbootstrap.com/docs/4.4/layout/grid/">Bootstrap Grid</a> system).
 To make images responsive, add `img-fluid` class to each; for rounded corners and shadows use `rounded` and `z-depth-1` classes.
 Here's the code for the last row of images above:
 

diff --git a/_projects/3_project.markdown → _projects/3_project.md b/_projects/3_project.markdown → _projects/3_project.md
@@ -63,7 +63,7 @@ You describe how you toiled, sweated, *bled* for your project, and then... you r
 
 
 The code is simple.
-Just wrap your images with `<div class="col-sm">` and place them inside `<div class="row">` (read more about the <a href="https://getbootstrap.com/docs/4.4/layout/grid/" target="_blank">Bootstrap Grid</a> system).
+Just wrap your images with `<div class="col-sm">` and place them inside `<div class="row">` (read more about the <a href="https://getbootstrap.com/docs/4.4/layout/grid/">Bootstrap Grid</a> system).
 To make images responsive, add `img-fluid` class to each; for rounded corners and shadows use `rounded` and `z-depth-1` classes.
 Here's the code for the last row of images above:
 

diff --git a/_projects/4_project.markdown → _projects/4_project.md b/_projects/4_project.markdown → _projects/4_project.md
@@ -62,7 +62,7 @@ You describe how you toiled, sweated, *bled* for your project, and then... you r
 
 
 The code is simple.
-Just wrap your images with `<div class="col-sm">` and place them inside `<div class="row">` (read more about the <a href="https://getbootstrap.com/docs/4.4/layout/grid/" target="_blank">Bootstrap Grid</a> system).
+Just wrap your images with `<div class="col-sm">` and place them inside `<div class="row">` (read more about the <a href="https://getbootstrap.com/docs/4.4/layout/grid/">Bootstrap Grid</a> system).
 To make images responsive, add `img-fluid` class to each; for rounded corners and shadows use `rounded` and `z-depth-1` classes.
 Here's the code for the last row of images above:
 

diff --git a/_projects/5_project.markdown → _projects/5_project.md b/_projects/5_project.markdown → _projects/5_project.md
@@ -62,7 +62,7 @@ You describe how you toiled, sweated, *bled* for your project, and then... you r
 
 
 The code is simple.
-Just wrap your images with `<div class="col-sm">` and place them inside `<div class="row">` (read more about the <a href="https://getbootstrap.com/docs/4.4/layout/grid/" target="_blank">Bootstrap Grid</a> system).
+Just wrap your images with `<div class="col-sm">` and place them inside `<div class="row">` (read more about the <a href="https://getbootstrap.com/docs/4.4/layout/grid/">Bootstrap Grid</a> system).
 To make images responsive, add `img-fluid` class to each; for rounded corners and shadows use `rounded` and `z-depth-1` classes.
 Here's the code for the last row of images above:
 

diff --git a/_projects/6_project.markdown → _projects/6_project.md b/_projects/6_project.markdown → _projects/6_project.md
@@ -62,7 +62,7 @@ You describe how you toiled, sweated, *bled* for your project, and then... you r
 
 
 The code is simple.
-Just wrap your images with `<div class="col-sm">` and place them inside `<div class="row">` (read more about the <a href="https://getbootstrap.com/docs/4.4/layout/grid/" target="_blank">Bootstrap Grid</a> system).
+Just wrap your images with `<div class="col-sm">` and place them inside `<div class="row">` (read more about the <a href="https://getbootstrap.com/docs/4.4/layout/grid/">Bootstrap Grid</a> system).
 To make images responsive, add `img-fluid` class to each; for rounded corners and shadows use `rounded` and `z-depth-1` classes.
 Here's the code for the last row of images above:
-Original file line number
+Diff line change
@@ Expand Up @@
     ***
-    Jean shorts raw denim Vice normcore, art party High Life PBR skateboard stumptown vinyl kitsch. Four loko meh 8-bit, tousled banh mi tilde forage Schlitz dreamcatcher twee 3 wolf moon. Chambray asymmetrical paleo salvia, sartorial umami four loko master cleanse drinking vinegar brunch. <a href="https://www.pinterest.com" target="blank">Pinterest</a> DIY authentic Schlitz, hoodie Intelligentsia butcher trust fund brunch shabby chic Kickstarter forage flexitarian. Direct trade <a href="https://en.wikipedia.org/wiki/Cold-pressed_juice" target="blank">cold-pressed</a> meggings stumptown plaid, pop-up taxidermy. Hoodie XOXO fingerstache scenester Echo Park. Plaid ugh Wes Anderson, freegan pug selvage fanny pack leggings pickled food truck DIY irony Banksy.
+    Jean shorts raw denim Vice normcore, art party High Life PBR skateboard stumptown vinyl kitsch. Four loko meh 8-bit, tousled banh mi tilde forage Schlitz dreamcatcher twee 3 wolf moon. Chambray asymmetrical paleo salvia, sartorial umami four loko master cleanse drinking vinegar brunch. <a href="https://www.pinterest.com">Pinterest</a> DIY authentic Schlitz, hoodie Intelligentsia butcher trust fund brunch shabby chic Kickstarter forage flexitarian. Direct trade <a href="https://en.wikipedia.org/wiki/Cold-pressed_juice">cold-pressed</a> meggings stumptown plaid, pop-up taxidermy. Hoodie XOXO fingerstache scenester Echo Park. Plaid ugh Wes Anderson, freegan pug selvage fanny pack leggings pickled food truck DIY irony Banksy.
     #### Hipster list
     <ul>
@@ Expand Down @@