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1. broadinstitute/CellBender broadinstitute/CellBender Public

   CellBender is a software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data.

   Python 293 53

2. ssDNA_MCMC ssDNA_MCMC Public

   MCMC sampler for ssDNA position configurations in solution. Allows the user to specify boundary conditions which correspond to experiments like stretching, trapping, tethering, and pulling on ssDNA…

   MATLAB

3. HMM HMM Public

   Hidden Markov models for biological time-series data, implemented from scratch in Matlab

   MATLAB 2 2

4. DataAcquisition DataAcquisition Public

   MATLAB graphical user interface for viewing and recording data using a National Instruments DAQ, tested specifically for the NI USB-6003.

   MATLAB 1 1

5. MultiChannelIO MultiChannelIO Public

   A clean interface for easy use of Python to communicate with a DAQ from National Instruments via PyDAQmx with the NIDAQmx driver. Tested for the NI USB-6003.

   Python 1

6. composable_MNIST composable_MNIST Public

   Generate handwriting training data by composing characters: numbers using MNIST or names using EMNIST

   Python