Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

perf: autobump bio/mtnucratio #3512

Merged
merged 2 commits into from
Nov 29, 2024
Merged

perf: autobump bio/mtnucratio #3512

merged 2 commits into from
Nov 29, 2024

Conversation

snakedeploy-bot[bot]
Copy link
Contributor

Automatic bump of bio/mtnucratio.

@coderabbitai coderabbitai
Copy link
Contributor

coderabbitai bot commented Nov 29, 2024

Important

Review skipped

Bot user detected.

To trigger a single review, invoke the @coderabbitai review command.

You can disable this status message by setting the reviews.review_status to false in the CodeRabbit configuration file.

🪧 Tips

Chat

There are 3 ways to chat with CodeRabbit:

  • Review comments: Directly reply to a review comment made by CodeRabbit. Example:
    • I pushed a fix in commit <commit_id>, please review it.
    • Generate unit testing code for this file.
    • Open a follow-up GitHub issue for this discussion.
  • Files and specific lines of code (under the "Files changed" tab): Tag @coderabbitai in a new review comment at the desired location with your query. Examples:
    • @coderabbitai generate unit testing code for this file.
    • @coderabbitai modularize this function.
  • PR comments: Tag @coderabbitai in a new PR comment to ask questions about the PR branch. For the best results, please provide a very specific query, as very limited context is provided in this mode. Examples:
    • @coderabbitai gather interesting stats about this repository and render them as a table. Additionally, render a pie chart showing the language distribution in the codebase.
    • @coderabbitai read src/utils.ts and generate unit testing code.
    • @coderabbitai read the files in the src/scheduler package and generate a class diagram using mermaid and a README in the markdown format.
    • @coderabbitai help me debug CodeRabbit configuration file.

Note: Be mindful of the bot's finite context window. It's strongly recommended to break down tasks such as reading entire modules into smaller chunks. For a focused discussion, use review comments to chat about specific files and their changes, instead of using the PR comments.

CodeRabbit Commands (Invoked using PR comments)

  • @coderabbitai pause to pause the reviews on a PR.
  • @coderabbitai resume to resume the paused reviews.
  • @coderabbitai review to trigger an incremental review. This is useful when automatic reviews are disabled for the repository.
  • @coderabbitai full review to do a full review from scratch and review all the files again.
  • @coderabbitai summary to regenerate the summary of the PR.
  • @coderabbitai resolve resolve all the CodeRabbit review comments.
  • @coderabbitai configuration to show the current CodeRabbit configuration for the repository.
  • @coderabbitai help to get help.

Other keywords and placeholders

  • Add @coderabbitai ignore anywhere in the PR description to prevent this PR from being reviewed.
  • Add @coderabbitai summary to generate the high-level summary at a specific location in the PR description.
  • Add @coderabbitai anywhere in the PR title to generate the title automatically.

CodeRabbit Configuration File (.coderabbit.yaml)

  • You can programmatically configure CodeRabbit by adding a .coderabbit.yaml file to the root of your repository.
  • Please see the configuration documentation for more information.
  • If your editor has YAML language server enabled, you can add the path at the top of this file to enable auto-completion and validation: # yaml-language-server: $schema=https://coderabbit.ai/integrations/schema.v2.json

Documentation and Community

  • Visit our Documentation for detailed information on how to use CodeRabbit.
  • Join our Discord Community to get help, request features, and share feedback.
  • Follow us on X/Twitter for updates and announcements.

mergify[bot]
mergify bot approved these changes Nov 29, 2024
View reviewed changes
Copy link

@mergify mergify bot left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Automatically approving successfull autobump

@mergify mergify bot merged commit 7f6a3b0 into master Nov 29, 2024
7 checks passed
@mergify mergify bot deleted the autobump/bio-mtnucratio branch November 29, 2024 03:37
johanneskoester pushed a commit that referenced this pull request Dec 6, 2024
@github-actions
chore: release 5.4.0 (#3505)
4b80c5d 
🤖 I have created a release \*beep\* \*boop\*
---
##
[5.4.0](https://www.github.com/snakemake/snakemake-wrappers/compare/v5.3.0...v5.4.0)
(2024-12-06)


### Features

* NGS-bits SampleAncestry
([#3502](https://www.github.com/snakemake/snakemake-wrappers/issues/3502))
([8600d44](https://www.github.com/snakemake/snakemake-wrappers/commit/8600d44e79ae4dafa181d3b06eed6e3db0c7a2df))
* NGS-bits SampleSimilarity
([#3500](https://www.github.com/snakemake/snakemake-wrappers/issues/3500))
([710597c](https://www.github.com/snakemake/snakemake-wrappers/commit/710597cdc4e7f518d1fda2ec246bb6a7e0e29ba9))
* NGSCheckMate make pattern
([#3499](https://www.github.com/snakemake/snakemake-wrappers/issues/3499))
([3b96cc1](https://www.github.com/snakemake/snakemake-wrappers/commit/3b96cc18b5a7ce8643fc3f8a492333d8f339e4c5))
* Sex.DetERRmine
([#3497](https://www.github.com/snakemake/snakemake-wrappers/issues/3497))
([3919f2e](https://www.github.com/snakemake/snakemake-wrappers/commit/3919f2e4b6fae381cf92c921e6f17086819de345))


### Performance Improvements

* autobump bio/bbtools
([#3507](https://www.github.com/snakemake/snakemake-wrappers/issues/3507))
([19d027d](https://www.github.com/snakemake/snakemake-wrappers/commit/19d027d176bfa5da7ec2d75b9222547b0fd2b919))
* autobump bio/busco
([#3506](https://www.github.com/snakemake/snakemake-wrappers/issues/3506))
([aad4b56](https://www.github.com/snakemake/snakemake-wrappers/commit/aad4b56df0ca427a0a12dba67bcf0edef51d545b))
* autobump bio/busco
([#3519](https://www.github.com/snakemake/snakemake-wrappers/issues/3519))
([6af2e11](https://www.github.com/snakemake/snakemake-wrappers/commit/6af2e11535a6407a0a60eaa18f7e15548e4a4a01))
* autobump bio/encode_fastq_downloader
([#3521](https://www.github.com/snakemake/snakemake-wrappers/issues/3521))
([cbf06d2](https://www.github.com/snakemake/snakemake-wrappers/commit/cbf06d227d2cece579b1bdff413d09036e2d976f))
* autobump bio/freebayes
([#3509](https://www.github.com/snakemake/snakemake-wrappers/issues/3509))
([12b8b3c](https://www.github.com/snakemake/snakemake-wrappers/commit/12b8b3ce9d5be65a2165b4ca3e0403935b950237))
* autobump bio/gatk3/baserecalibrator
([#3523](https://www.github.com/snakemake/snakemake-wrappers/issues/3523))
([7a7518e](https://www.github.com/snakemake/snakemake-wrappers/commit/7a7518e63e0c6eac8d7cb935808b8692e4e688ff))
* autobump bio/gatk3/indelrealigner
([#3525](https://www.github.com/snakemake/snakemake-wrappers/issues/3525))
([a0d913c](https://www.github.com/snakemake/snakemake-wrappers/commit/a0d913ce81ceb45aeff0eeee8e1e92e63bda786c))
* autobump bio/gatk3/printreads
([#3524](https://www.github.com/snakemake/snakemake-wrappers/issues/3524))
([67af9a6](https://www.github.com/snakemake/snakemake-wrappers/commit/67af9a6899872a5e2e8cabc58572aa31d51a43cc))
* autobump bio/gatk3/realignertargetcreator
([#3522](https://www.github.com/snakemake/snakemake-wrappers/issues/3522))
([5f8ffe7](https://www.github.com/snakemake/snakemake-wrappers/commit/5f8ffe7349ab24d55d45e1811519b2b9e9985068))
* autobump bio/hifiasm
([#3510](https://www.github.com/snakemake/snakemake-wrappers/issues/3510))
([2b1b9f2](https://www.github.com/snakemake/snakemake-wrappers/commit/2b1b9f265231a3f3bc121dd9d4f34111b15d4486))
* autobump bio/mapdamage2
([#3526](https://www.github.com/snakemake/snakemake-wrappers/issues/3526))
([92da252](https://www.github.com/snakemake/snakemake-wrappers/commit/92da252bcafd05a0187b635b1938593aa4268c3b))
* autobump bio/mosdepth
([#3511](https://www.github.com/snakemake/snakemake-wrappers/issues/3511))
([762b273](https://www.github.com/snakemake/snakemake-wrappers/commit/762b273800120519ffd2bc2f670ae93be6187cac))
* autobump bio/mtnucratio
([#3512](https://www.github.com/snakemake/snakemake-wrappers/issues/3512))
([7f6a3b0](https://www.github.com/snakemake/snakemake-wrappers/commit/7f6a3b07cc2bae16fb30c097e783b70e87ad58f1))
* autobump bio/ngsbits/sampleancestry
([#3527](https://www.github.com/snakemake/snakemake-wrappers/issues/3527))
([2abf38c](https://www.github.com/snakemake/snakemake-wrappers/commit/2abf38c30e541dd45563ee7ec3959ccf43802fab))
* autobump bio/ngsbits/samplesimilarity
([#3529](https://www.github.com/snakemake/snakemake-wrappers/issues/3529))
([c91ce10](https://www.github.com/snakemake/snakemake-wrappers/commit/c91ce1075792f231d833a89298e88353c96973b1))
* autobump bio/ngscheckmate/makesnvpattern
([#3528](https://www.github.com/snakemake/snakemake-wrappers/issues/3528))
([ff9a81d](https://www.github.com/snakemake/snakemake-wrappers/commit/ff9a81d923b8efc807f0054400d03c6277777cb8))
* autobump bio/reference/ensembl-mysql-table
([#3513](https://www.github.com/snakemake/snakemake-wrappers/issues/3513))
([6b5c545](https://www.github.com/snakemake/snakemake-wrappers/commit/6b5c5454e86cfd393e5fa55b86566e60ef43dd5c))
* autobump bio/sexdeterrmine
([#3514](https://www.github.com/snakemake/snakemake-wrappers/issues/3514))
([2b18309](https://www.github.com/snakemake/snakemake-wrappers/commit/2b183092fd31225462490d43df5916e678ea5f83))
* autobump bio/spades/metaspades
([#3530](https://www.github.com/snakemake/snakemake-wrappers/issues/3530))
([070b9b6](https://www.github.com/snakemake/snakemake-wrappers/commit/070b9b62af3cc79f7a4fe1500963892631f8d752))
* autobump bio/varlociraptor/call-variants
([#3533](https://www.github.com/snakemake/snakemake-wrappers/issues/3533))
([8c563f1](https://www.github.com/snakemake/snakemake-wrappers/commit/8c563f18f02f3f06760f2f25ad85383f9d776b2d))
* autobump bio/varlociraptor/control-fdr
([#3532](https://www.github.com/snakemake/snakemake-wrappers/issues/3532))
([ce7d1b0](https://www.github.com/snakemake/snakemake-wrappers/commit/ce7d1b00bdf6a856ffe5ed6bac7258ca970cde4a))
* autobump bio/varlociraptor/estimate-alignment-properties
([#3531](https://www.github.com/snakemake/snakemake-wrappers/issues/3531))
([0b5ac04](https://www.github.com/snakemake/snakemake-wrappers/commit/0b5ac04792bcd54984ea6b0e6af41efa33fba126))
* autobump bio/varlociraptor/preprocess-variants
([#3534](https://www.github.com/snakemake/snakemake-wrappers/issues/3534))
([56a8933](https://www.github.com/snakemake/snakemake-wrappers/commit/56a8933de936e20e0068bd1d8cb6bbea3826f655))
* autobump bio/vep/annotate
([#3515](https://www.github.com/snakemake/snakemake-wrappers/issues/3515))
([2609900](https://www.github.com/snakemake/snakemake-wrappers/commit/26099008485dbf5a8054f3284a1892dd1245ac8a))
* autobump bio/vep/cache
([#3516](https://www.github.com/snakemake/snakemake-wrappers/issues/3516))
([f46427c](https://www.github.com/snakemake/snakemake-wrappers/commit/f46427c7951ad1a2ccd142b74698aac3009b2c66))
* autobump bio/vep/plugins
([#3535](https://www.github.com/snakemake/snakemake-wrappers/issues/3535))
([9a6ccc3](https://www.github.com/snakemake/snakemake-wrappers/commit/9a6ccc34ce5db38c419076d7f707321bf69357dc))
* autobump bio/vg/giraffe
([#3517](https://www.github.com/snakemake/snakemake-wrappers/issues/3517))
([6fffdd6](https://www.github.com/snakemake/snakemake-wrappers/commit/6fffdd6caec48f099b6140dd113a295f7202fa63))
* autobump utils/csvtk
([#3508](https://www.github.com/snakemake/snakemake-wrappers/issues/3508))
([41e8545](https://www.github.com/snakemake/snakemake-wrappers/commit/41e8545b5663c91d6b13b5acd2c126a6b42a9a92))
* autobump utils/csvtk
([#3520](https://www.github.com/snakemake/snakemake-wrappers/issues/3520))
([d4a52e5](https://www.github.com/snakemake/snakemake-wrappers/commit/d4a52e5e900aa16cad66ebbea1b22fb27d3709ea))
---


This PR was generated with [Release
Please](https://github.com/googleapis/release-please). See
[documentation](https://github.com/googleapis/release-please#release-please).

Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Reviewers

@mergify mergify[bot] mergify[bot] approved these changes

Assignees
No one assigned
Labels
bio/mtnucratio
Projects
None yet
Milestone
No milestone
Development

Successfully merging this pull request may close these issues.
0 participants