MRG: update to sourmash v4.8.13 (python package) (#583)

* print out sourmash version

* MRG: update to require sourmash v4.8.13

* upd

environment.yml

@@ -4,7 +4,7 @@ channels:
     - bioconda
     - defaults
 dependencies:
-    - sourmash>=4.8.3,<5
+    - sourmash>=4.8.13,<5
     - pip
     - rust
     - maturin>=1,<2

pyproject.toml

@@ -9,7 +9,7 @@ classifiers = [
     "Programming Language :: Python :: Implementation :: CPython",
     "Programming Language :: Python :: Implementation :: PyPy",
     ]
-dependencies = ["sourmash>=4.8.10,<5"]
+dependencies = ["sourmash>=4.8.13,<5"]
 
 authors = [
   { name="N. Tessa Pierce-Ward", orcid="0000-0002-2942-5331" },

src/python/tests/test_sketch.py

@@ -1438,16 +1438,8 @@ def test_manysketch_skipm2n3(runtmp, capfd):
     sigs = list(idx.signatures())
     print(sigs)
 
-    # add in a version check so this works under latest release AND latest
-    # dev.
-    ver = sourmash.version("sourmash")
-    major, minor, micro = map(int, ver.split(".")[:3])
-    assert major == 4
-    assert minor >= 8
-    if "dev" in ver:
-        assert len(sigs) == 6  # 3 dna, 3 skipmer.
-    else:
-        assert len(sigs) == 3  # 3 dna, 3 skipmer but not recognized yet.
+    # note: requires sourmash v4.8.13 or later.
+    assert len(sigs) == 6  # 3 dna, 3 skipmer.
 
     # check moltypes, etc!
     dna_md5sums = {