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Respect loaded mask cube properly in spectral extraction. #10987

Respect loaded mask cube properly in spectral extraction.

Respect loaded mask cube properly in spectral extraction. #10987

Workflow file for this run

name: CI
on:
push:
branches:
- main
- 'v*'
tags:
- 'v*'
pull_request:
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
permissions:
contents: read
jobs:
# Github Actions supports ubuntu, windows, and macos virtual environments:
# https://help.github.com/en/actions/reference/virtual-environments-for-github-hosted-runners
ci_tests:
name: ${{ matrix.name }}
runs-on: ${{ matrix.os }}
continue-on-error: ${{ matrix.allow_failure }}
strategy:
matrix:
include:
- name: Code style checks
os: ubuntu-latest
python: 3.x
toxenv: codestyle
allow_failure: false
- name: PEP 517
os: ubuntu-latest
python: 3.x
toxenv: pep517
allow_failure: false
- name: Security audit
os: ubuntu-latest
python: 3.x
toxenv: securityaudit
allow_failure: false
- name: Python 3.11 with coverage checking, all deps, and remote data
os: ubuntu-latest
python: '3.11'
toxenv: py311-test-alldeps-cov
toxposargs: --remote-data --run-slow
allow_failure: false
- name: OS X - Python 3.12
os: macos-latest
python: '3.12'
toxenv: py312-test
allow_failure: false
- name: Windows - Python 3.10
os: windows-latest
python: '3.10'
toxenv: py310-test
allow_failure: false
# This also runs on cron but we want to make sure new changes
# won't break this job at the PR stage.
- name: Python 3.12 with latest dev versions of key dependencies, and remote data
os: ubuntu-latest
python: '3.12'
toxenv: py312-test-devdeps
toxposargs: --remote-data --run-slow
allow_failure: true
steps:
- name: Checkout code
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
with:
fetch-depth: 0
- name: Set up python ${{ matrix.python }} on ${{ matrix.os }}
uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b # v5.3.0
with:
python-version: ${{ matrix.python }}
- name: Install base dependencies
run: python -m pip install --upgrade pip tox
- name: Test/run with tox
run: tox -e ${{ matrix.toxenv }} -- ${{ matrix.toxposargs }}
- name: Upload coverage to artifacts
if: "contains(matrix.toxenv, '-cov')"
uses: actions/upload-artifact@b4b15b8c7c6ac21ea08fcf65892d2ee8f75cf882 # v4.4.3
with:
name: coverage_${{ matrix.toxenv }}.xml
path: coverage.xml
if-no-files-found: error
upload-codecov:
needs: [ ci_tests ]
permissions:
contents: none
runs-on: ubuntu-latest
name: Upload Coverage
steps:
- name: Download coverage artifacts
uses: actions/download-artifact@fa0a91b85d4f404e444e00e005971372dc801d16 # v4.1.8
with:
path: coverage
pattern: coverage_*
merge-multiple: true
- name: Upload report to Codecov
if: ${{ hashFiles('coverage/') != '' }}
uses: codecov/codecov-action@b9fd7d16f6d7d1b5d2bec1a2887e65ceed900238 # v4.6.0
with:
token: ${{ secrets.CODECOV_TOKEN }}
directory: coverage
fail_ci_if_error: true
verbose: true