`ShellJob`: Add `metadata.options.output_filename` to retrieve list #541

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Run time

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Job	Run time
pre-commit	3m 15s
tests (3.9)	3m 49s
tests (3.10)	1m 27s
tests (3.11)	3m 47s
tests (3.12)	3m 55s
	16m 13s