Add rootlets ground truth labels for 3 images. These labels come from…

… 4 manual raters and the STAPLE algorithm and were part of the testing dataset D5. For details; see https://github.com/ivadomed/model-spinal-rootlets/tree/main/training and ivadomed/model-spinal-rootlets#17

derivatives/labels/sub-amu02/anat/sub-amu02_T2w_label-rootlets_dseg_desc-rater1.json

@@ -0,0 +1,11 @@
+{
+ "SpatialReference": "orig",
+ "GeneratedBy": [
+ {
+ "Name": "Manual",
+ "Author": "Theo Mathieu",
+ "Description": "Manually created label of dorsal rootlets C2-C8 used to assess the inter-rater variability and test the model M5; details: https://github.com/ivadomed/model-spinal-rootlets/issues/17 and https://github.com/ivadomed/model-spinal-rootlets/pull/23#issuecomment-1836305457",
+ "Date": "2023-12-01"
+ }
+ ]
+}

derivatives/labels/sub-amu02/anat/sub-amu02_T2w_label-rootlets_dseg_desc-rater1.nii.gz

@@ -0,0 +1 @@
+/annex/objects/SHA256E-s231587--703bb31bbda6fac63f90a68ca79fef013df708ef2ef13e2ac7545dbee4f08c6b.nii.gz

derivatives/labels/sub-amu02/anat/sub-amu02_T2w_label-rootlets_dseg_desc-rater2.json

@@ -0,0 +1,11 @@
+{
+ "SpatialReference": "orig",
+ "GeneratedBy": [
+ {
+ "Name": "Manual",
+ "Author": "Raphaëlle Schlienger",
+ "Description": "Manually created label of dorsal rootlets C2-C8 used to assess the inter-rater variability and test the model M5; details: https://github.com/ivadomed/model-spinal-rootlets/issues/17 and https://github.com/ivadomed/model-spinal-rootlets/pull/23#issuecomment-1836305457",
+ "Date": "2023-12-01"
+ }
+ ]
+}

derivatives/labels/sub-amu02/anat/sub-amu02_T2w_label-rootlets_dseg_desc-rater2.nii.gz

@@ -0,0 +1 @@
+/annex/objects/SHA256E-s52750--01e484b62bc7bc5f3a9927b5eaf9cb57f7855beb814f0f5c740cec50440ac386.nii.gz

derivatives/labels/sub-amu02/anat/sub-amu02_T2w_label-rootlets_dseg_desc-rater3.json

@@ -0,0 +1,11 @@
+{
+ "SpatialReference": "orig",
+ "GeneratedBy": [
+ {
+ "Name": "Manual",
+ "Author": "Jan Valošek",
+ "Description": "Manually created label of dorsal rootlets C2-C8 used to assess the inter-rater variability and test the model M5; details: https://github.com/ivadomed/model-spinal-rootlets/issues/17 and https://github.com/ivadomed/model-spinal-rootlets/pull/23#issuecomment-1836305457",
+ "Date": "2023-12-01"
+ }
+ ]
+}

derivatives/labels/sub-amu02/anat/sub-amu02_T2w_label-rootlets_dseg_desc-rater3.nii.gz

@@ -0,0 +1 @@
+/annex/objects/SHA256E-s231033--b8ac5ca846227008a5ed2f576bc37526552da982201a435c261009abb1b5748a.nii.gz

derivatives/labels/sub-amu02/anat/sub-amu02_T2w_label-rootlets_dseg_desc-rater4.json

@@ -0,0 +1,11 @@
+{
+ "SpatialReference": "orig",
+ "GeneratedBy": [
+ {
+ "Name": "Manual",
+ "Author": "Olivia Kowalczyk",
+ "Description": "Manually created label of dorsal rootlets C2-C8 used to assess the inter-rater variability and test the model M5; details: https://github.com/ivadomed/model-spinal-rootlets/issues/17 and https://github.com/ivadomed/model-spinal-rootlets/pull/23#issuecomment-1836305457",
+ "Date": "2023-12-01"
+ }
+ ]
+}

derivatives/labels/sub-amu02/anat/sub-amu02_T2w_label-rootlets_dseg_desc-rater4.nii.gz

@@ -0,0 +1 @@
+/annex/objects/SHA256E-s232263--5342e0d69dd0894c9a66334e3b83519a978beee422906b89e31211135727ccbc.nii.gz

derivatives/labels/sub-amu02/anat/sub-amu02_T2w_label-rootlets_dseg_desc-staple.json

@@ -0,0 +1,11 @@
+{
+ "SpatialReference": "orig",
+ "GeneratedBy": [
+ {
+ "Name": "Manual",
+ "Author": "STAPLE",
+ "Description": "Reference ground truth label (created using the STAPLE algorithm) of dorsal rootlets C2-C8 used to test the model M5; details: https://github.com/ivadomed/model-spinal-rootlets/issues/17 and https://github.com/ivadomed/model-spinal-rootlets/pull/23#issuecomment-1836305457",
+ "Date": "2023-12-01"
+ }
+ ]
+}

derivatives/labels/sub-amu02/anat/sub-amu02_T2w_label-rootlets_dseg_desc-staple.nii.gz

@@ -0,0 +1 @@
+/annex/objects/SHA256E-s7576--04f1f68df8013befa96d9734828889119bfadf472c0aeb9be369789dcb336ef5.nii.gz

derivatives/labels/sub-barcelona01/anat/sub-barcelona01_T2w_label-rootlets_dseg_desc-rater1.json

@@ -0,0 +1,11 @@
+{
+ "SpatialReference": "orig",
+ "GeneratedBy": [
+ {
+ "Name": "Manual",
+ "Author": "Theo Mathieu",
+ "Description": "Manually created label of dorsal rootlets C2-C8 used to assess the inter-rater variability and test the model M5; details: https://github.com/ivadomed/model-spinal-rootlets/issues/17 and https://github.com/ivadomed/model-spinal-rootlets/pull/23#issuecomment-1836305457",
+ "Date": "2023-12-01"
+ }
+ ]
+}

derivatives/labels/sub-barcelona01/anat/sub-barcelona01_T2w_label-rootlets_dseg_desc-rater1.nii.gz

@@ -0,0 +1 @@
+/annex/objects/SHA256E-s233873--17162e121e0b9b2c0d6bff7032dbb114b3998095c29e0f441c265de4a510a86e.nii.gz

derivatives/labels/sub-barcelona01/anat/sub-barcelona01_T2w_label-rootlets_dseg_desc-rater2.json

@@ -0,0 +1,11 @@
+{
+ "SpatialReference": "orig",
+ "GeneratedBy": [
+ {
+ "Name": "Manual",
+ "Author": "Raphaëlle Schlienger",
+ "Description": "Manually created label of dorsal rootlets C2-C8 used to assess the inter-rater variability and test the model M5; details: https://github.com/ivadomed/model-spinal-rootlets/issues/17 and https://github.com/ivadomed/model-spinal-rootlets/pull/23#issuecomment-1836305457",
+ "Date": "2023-12-01"
+ }
+ ]
+}

derivatives/labels/sub-barcelona01/anat/sub-barcelona01_T2w_label-rootlets_dseg_desc-rater2.nii.gz

@@ -0,0 +1 @@
+/annex/objects/SHA256E-s53626--2903800749fb705f13e673bd49f30e281641ec8b3e9085a1801334228c1a29b7.nii.gz

derivatives/labels/sub-barcelona01/anat/sub-barcelona01_T2w_label-rootlets_dseg_desc-rater3.json

@@ -0,0 +1,11 @@
+{
+ "SpatialReference": "orig",
+ "GeneratedBy": [
+ {
+ "Name": "Manual",
+ "Author": "Jan Valošek",
+ "Description": "Manually created label of dorsal rootlets C2-C8 used to assess the inter-rater variability and test the model M5; details: https://github.com/ivadomed/model-spinal-rootlets/issues/17 and https://github.com/ivadomed/model-spinal-rootlets/pull/23#issuecomment-1836305457",
+ "Date": "2023-12-01"
+ }
+ ]
+}

derivatives/labels/sub-barcelona01/anat/sub-barcelona01_T2w_label-rootlets_dseg_desc-rater3.nii.gz

@@ -0,0 +1 @@
+/annex/objects/SHA256E-s233878--4d22dace4aa4822890fa4fa80e0bc23b8b56a7bf1f58d8adcacf19ee7fe32e21.nii.gz

derivatives/labels/sub-barcelona01/anat/sub-barcelona01_T2w_label-rootlets_dseg_desc-rater4.json

@@ -0,0 +1,11 @@
+{
+ "SpatialReference": "orig",
+ "GeneratedBy": [
+ {
+ "Name": "Manual",
+ "Author": "Olivia Kowalczyk",
+ "Description": "Manually created label of dorsal rootlets C2-C8 used to assess the inter-rater variability and test the model M5; details: https://github.com/ivadomed/model-spinal-rootlets/issues/17 and https://github.com/ivadomed/model-spinal-rootlets/pull/23#issuecomment-1836305457",
+ "Date": "2023-12-01"
+ }
+ ]
+}

derivatives/labels/sub-barcelona01/anat/sub-barcelona01_T2w_label-rootlets_dseg_desc-rater4.nii.gz

@@ -0,0 +1 @@
+/annex/objects/SHA256E-s234990--e0fca05481d550bbb11b2f31aa786ba1f5f67850394214e3b44d1d000809af62.nii.gz

derivatives/labels/sub-barcelona01/anat/sub-barcelona01_T2w_label-rootlets_dseg_desc-staple.json

@@ -0,0 +1,11 @@
+{
+ "SpatialReference": "orig",
+ "GeneratedBy": [
+ {
+ "Name": "Manual",
+ "Author": "STAPLE",
+ "Description": "Reference ground truth label (created using the STAPLE algorithm) of dorsal rootlets C2-C8 used to test the model M5; details: https://github.com/ivadomed/model-spinal-rootlets/issues/17 and https://github.com/ivadomed/model-spinal-rootlets/pull/23#issuecomment-1836305457",
+ "Date": "2023-12-01"
+ }
+ ]
+}

derivatives/labels/sub-barcelona01/anat/sub-barcelona01_T2w_label-rootlets_dseg_desc-staple.nii.gz

@@ -0,0 +1 @@
+/annex/objects/SHA256E-s8578--d81921c9fda67565f58d9218b0f93205f5b43e710e1605e3a6fb76c40284a726.nii.gz

derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_T2w_label-rootlets_dseg_desc-rater1.json

@@ -0,0 +1,11 @@
+{
+ "SpatialReference": "orig",
+ "GeneratedBy": [
+ {
+ "Name": "Manual",
+ "Author": "Theo Mathieu",
+ "Description": "Manually created label of dorsal rootlets C2-C8 used to assess the inter-rater variability and test the model M5; details: https://github.com/ivadomed/model-spinal-rootlets/issues/17 and https://github.com/ivadomed/model-spinal-rootlets/pull/23#issuecomment-1836305457",
+ "Date": "2023-12-01"
+ }
+ ]
+}

derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_T2w_label-rootlets_dseg_desc-rater1.nii.gz

@@ -0,0 +1 @@
+/annex/objects/SHA256E-s523830--8ec69bfc149a2fc8a73175dae14c2108fbd5ffc234f4b5666993597df9fcd7d2.nii.gz

derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_T2w_label-rootlets_dseg_desc-rater2.json

@@ -0,0 +1,11 @@
+{
+ "SpatialReference": "orig",
+ "GeneratedBy": [
+ {
+ "Name": "Manual",
+ "Author": "Raphaëlle Schlienger",
+ "Description": "Manually created label of dorsal rootlets C2-C8 used to assess the inter-rater variability and test the model M5; details: https://github.com/ivadomed/model-spinal-rootlets/issues/17 and https://github.com/ivadomed/model-spinal-rootlets/pull/23#issuecomment-1836305457",
+ "Date": "2023-12-01"
+ }
+ ]
+}

derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_T2w_label-rootlets_dseg_desc-rater2.nii.gz

@@ -0,0 +1 @@
+/annex/objects/SHA256E-s119917--ead6ae9b4a9856b2e5b3524b6cee5bf232f3bbf6070524616c14626a939af2ec.nii.gz

derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_T2w_label-rootlets_dseg_desc-rater3.json

@@ -0,0 +1,11 @@
+{
+ "SpatialReference": "orig",
+ "GeneratedBy": [
+ {
+ "Name": "Manual",
+ "Author": "Jan Valošek",
+ "Description": "Manually created label of dorsal rootlets C2-C8 used to assess the inter-rater variability and test the model M5; details: https://github.com/ivadomed/model-spinal-rootlets/issues/17 and https://github.com/ivadomed/model-spinal-rootlets/pull/23#issuecomment-1836305457",
+ "Date": "2023-12-01"
+ }
+ ]
+}

derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_T2w_label-rootlets_dseg_desc-rater3.nii.gz

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+/annex/objects/SHA256E-s521712--c35eff6e159e6f76c2a5417ee685920170b5260b40c3a92a6f2e1aa70ac28fa6.nii.gz

derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_T2w_label-rootlets_dseg_desc-rater4.json

@@ -0,0 +1,11 @@
+{
+ "SpatialReference": "orig",
+ "GeneratedBy": [
+ {
+ "Name": "Manual",
+ "Author": "Olivia Kowalczyk",
+ "Description": "Manually created label of dorsal rootlets C2-C8 used to assess the inter-rater variability and test the model M5; details: https://github.com/ivadomed/model-spinal-rootlets/issues/17 and https://github.com/ivadomed/model-spinal-rootlets/pull/23#issuecomment-1836305457",
+ "Date": "2023-12-01"
+ }
+ ]
+}

derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_T2w_label-rootlets_dseg_desc-rater4.nii.gz

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+/annex/objects/SHA256E-s525735--10d4415fbbce449d62fd8e2311fead8de5bbda10060c6a7d3072fc948de43c47.nii.gz

derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_T2w_label-rootlets_dseg_desc-staple.json

@@ -0,0 +1,11 @@
+{
+ "SpatialReference": "orig",
+ "GeneratedBy": [
+ {
+ "Name": "Manual",
+ "Author": "STAPLE",
+ "Description": "Reference ground truth label (created using the STAPLE algorithm) of dorsal rootlets C2-C8 used to test the model M5; details: https://github.com/ivadomed/model-spinal-rootlets/issues/17 and https://github.com/ivadomed/model-spinal-rootlets/pull/23#issuecomment-1836305457",
+ "Date": "2023-12-01"
+ }
+ ]
+}

derivatives/labels/sub-brnoUhb03/anat/sub-brnoUhb03_T2w_label-rootlets_dseg_desc-staple.nii.gz

@@ -0,0 +1 @@
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