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anno list
Rob Flickenger edited this page Aug 9, 2021
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To see a list of all available annotations, use biograph vdb anno list
. This displays the annotation name, version, import date, reference build, annotation count, aid, and description for every available annotation.
$ biograph vdb anno list
anno_name version imported_on build annotations aid description
ClinVar 2020-10-03 2021-04-28 15:55:55 GRCh37 775850 c8d42e04-80ae-415d-a848-2b162dcb7f86
ClinVar 2020-10-03 2021-04-28 15:55:15 GRCh38 776050 ffff2168-89ac-4ff4-9ddd-788b26e4aa69
Ensembl release-101 2021-04-29 14:52:55 GRCh38 2646896 ffd56a95-ef83-44aa-9df4-b12f389c94b3
dbSNP 151 2021-04-28 16:23:59 GRCh37 685132792 c50ed9ad-443b-4321-9f37-7348a99275ec
$ biograph vdb anno list --help
usage: biograph vdb anno list [-h]
List all available annotations
optional arguments:
-h, --help show this help message and exit