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To submit to Flathub there are a few requirements https://github.com/flathub/flathub/wiki/App-Requirements
This adds a .desktop and appstream .metadata files. It also installs these to the expected locations. This will also cause b-em to be added to the linux application menus when installed normally.
There are a few choice that might need reviewing.
There are few other things needed to be included on flathub:
A tagged release. Flathub needs to build from a release tag https://github.com/flathub/flathub/wiki/App-Requirements#stable-releases-reproducible-builds
Sandbox permissions. Ideally flatpak packages are sandboxed with limited access to the filesystem. I think most users would want read and write access to disks stored in their home folder. But this could be restricted to only the document folder. This would be specified in the flatpak yaml file that gets put in the flatpak repository.