v1.04

v1.04

• Added --addSpecIds flag which adds a column to the output files with the scan id/title (#26)
• Fixed parsing of scan number for mgf files (#22)

1.03.1

v1.03.1

• Update file indices when reusing dat files

1.03

v1.03

• Reuse converted raw to internal binary format files

1.02.1

v1.02.1

• Fix file_list.txt reading to not split on spaces in file paths

1.02

v1.02

• Update to newest ProteoWizard version (using boost 1.76 instead of 1.67)
• Add check for empty vector of spectra considered for clustering (#21)
• Split overlap clustering in batches
• Better fix for nativeId issue (#19)

1.01.1

v1.01.1

• Fixing several build issues
• Added OpenMP in osx build
• Undo nativeId fix which broke mgf and mzML output for consensus spectrum file (#19)

1.01

v1.01

• Fixing several build issues
• Fixed nativeId issue with new ProteoWizard version for MS2 format
• Consensus spectra for MS1 profile data (#9)
• Added tarball release as package option (#8, #18)
• Clarified names of temporary spectrum files
• Fixed bug with creation of output file in current dir

1.00.1

v1.00.1

• Fixes infinite loop issue in counting cluster sizes (#17)

1.00

v1.00

• Added GUI packages using the Qt framework
• Changed output format to include cluster identifier and removed columns for peptide identifications
• Added support for producing consensus spectra directly using the 'maracluster batch' command
• Fixed issues for large precursor window clustering
• Improved logging and input arguments
• Updated ProteoWizard installation to use last successful build on TeamCity

0.05

v0.05

• Fixed several minor issues with race conditions resulting in differing consensus outputs
• Fixed problem with high memory usage in poisoned p-value clustering