fix: `read_physical_structures` failing for multi-layer BDs. #394

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Job	Run time
check	3s
build (windows-2022, 32)	3m 18s
build (windows-2022, 64)	3m 54s
build (ubuntu-24.04, 64)	4m 7s
build (macos-14, 64)	4m 2s
release	0s
	15m 24s