Fix manual file generation and include trailing newlines in accordanc…

…e with POSIX [AP-3048] (#1453)

# Description

@swift-nav/algint-team

<!-- Changes proposed in this PR -->

# API compatibility

Does this change introduce a API compatibility risk?
No, this change is only fixing non-functional issues in the project.

<!-- Provide a short explanation why or why not -->

## API compatibility plan

If the above is "Yes", please detail the compatibility (or migration)
plan:

<!-- Provide a short explanation plan here -->

# JIRA Reference

https://swift-nav.atlassian.net/browse/AP-3048

README.md

@@ -12,7 +12,7 @@
   * [Installing development Python versions](#installing-development-python-versions)
   * [Adding development version as a pip dependency](#adding-development-version-as-a-pip-dependency)
   * [Installing from source](#installing-from-source)
-- [SBP Development Procedures](#sbp-development-procedures)  
+- [SBP Development Procedures](#sbp-development-procedures)
 - [SBP Protocol Specification](#sbp-protocol-specification)
 - [JSON Schema Definitions](#json-schema-definitions)
 - [Kaitai Struct Format Descriptions](#kaitai-struct-format-descriptions)
@@ -102,7 +102,7 @@ but works on all platforms that Python itself supports.
 
 ## Building / installing
 
-Before you start, run 
+Before you start, run
 ```
 git pull --tags
 ```
@@ -151,7 +151,9 @@ You can then make this image operate on your local workspace like this:
 
 #### Using the docker image
 
-Once in the image, simply type `make all` to generate all the libsbp bindings.
+Once in the image, to overcome issues with git trying to determine ownership of
+the repository, run `git config --global --add safe.directory /mnt/workspace`.
+Then, simply type `make all` to generate all the libsbp bindings.
 This could take several hours to run.  Alternately, the docker image will run
 the `make all` command by default, so you can kick off the `make all` process
 by simply running the following command:

c/test/auto_check_sbp_acquisition_MsgAcqResult.c

@@ -175,4 +175,4 @@ Suite *auto_check_sbp_acquisition_MsgAcqResult_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_acquisition_MsgAcqResult);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_acquisition_MsgAcqResultDepA.c

@@ -562,4 +562,4 @@ Suite *auto_check_sbp_acquisition_MsgAcqResultDepA_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_acquisition_MsgAcqResultDepA);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_acquisition_MsgAcqResultDepB.c

@@ -559,4 +559,4 @@ Suite *auto_check_sbp_acquisition_MsgAcqResultDepB_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_acquisition_MsgAcqResultDepB);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_acquisition_MsgAcqResultDepC.c

@@ -564,4 +564,4 @@ Suite *auto_check_sbp_acquisition_MsgAcqResultDepC_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_acquisition_MsgAcqResultDepC);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_acquisition_MsgAcqSvProfile.c

@@ -494,4 +494,4 @@ Suite *auto_check_sbp_acquisition_MsgAcqSvProfile_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_acquisition_MsgAcqSvProfile);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_acquisition_MsgAcqSvProfileDep.c

@@ -534,4 +534,4 @@ Suite *auto_check_sbp_acquisition_MsgAcqSvProfileDep_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_acquisition_MsgAcqSvProfileDep);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_bootload_MsgBootloaderHandshakeReq.c

@@ -139,4 +139,4 @@ Suite *auto_check_sbp_bootload_MsgBootloaderHandshakeReq_suite(void) {
                  test_auto_check_sbp_bootload_MsgBootloaderHandshakeReq);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_bootload_MsgBootloaderHandshakeResp.c

@@ -231,4 +231,4 @@ Suite *auto_check_sbp_bootload_MsgBootloaderHandshakeResp_suite(void) {
                  test_auto_check_sbp_bootload_MsgBootloaderHandshakeResp);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_bootload_MsgBootloaderJumptoApp.c

@@ -146,4 +146,4 @@ Suite *auto_check_sbp_bootload_MsgBootloaderJumptoApp_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_bootload_MsgBootloaderJumptoApp);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_bootload_MsgNapDeviceDnaReq.c

@@ -137,4 +137,4 @@ Suite *auto_check_sbp_bootload_MsgNapDeviceDnaReq_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_bootload_MsgNapDeviceDnaReq);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_bootload_MsgNapDeviceDnaResp.c

@@ -194,4 +194,4 @@ Suite *auto_check_sbp_bootload_MsgNapDeviceDnaResp_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_bootload_MsgNapDeviceDnaResp);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_ext_events_MsgExtEvent.c

@@ -172,4 +172,4 @@ Suite *auto_check_sbp_ext_events_MsgExtEvent_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_ext_events_MsgExtEvent);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_file_io_MsgFileioConfigReq.c

@@ -145,4 +145,4 @@ Suite *auto_check_sbp_file_io_MsgFileioConfigReq_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_file_io_MsgFileioConfigReq);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_file_io_MsgFileioConfigResp.c

@@ -170,4 +170,4 @@ Suite *auto_check_sbp_file_io_MsgFileioConfigResp_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_file_io_MsgFileioConfigResp);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_file_io_MsgFileioReadDirReq.c

@@ -174,4 +174,4 @@ Suite *auto_check_sbp_file_io_MsgFileioReadDirReq_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_file_io_MsgFileioReadDirReq);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_file_io_MsgFileioReadDirResp.c

@@ -178,4 +178,4 @@ Suite *auto_check_sbp_file_io_MsgFileioReadDirResp_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_file_io_MsgFileioReadDirResp);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_file_io_MsgFileioReadReq.c

@@ -180,4 +180,4 @@ Suite *auto_check_sbp_file_io_MsgFileioReadReq_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_file_io_MsgFileioReadReq);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_file_io_MsgFileioReadResp.c

@@ -1928,4 +1928,4 @@ Suite *auto_check_sbp_file_io_MsgFileioReadResp_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_file_io_MsgFileioReadResp);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_file_io_MsgFileioRemove.c

@@ -157,4 +157,4 @@ Suite *auto_check_sbp_file_io_MsgFileioRemove_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_file_io_MsgFileioRemove);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_file_io_MsgFileioWriteResp.c

@@ -145,4 +145,4 @@ Suite *auto_check_sbp_file_io_MsgFileioWriteResp_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_file_io_MsgFileioWriteResp);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_flash_MsgFlashDone.c

@@ -144,4 +144,4 @@ Suite *auto_check_sbp_flash_MsgFlashDone_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_flash_MsgFlashDone);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_flash_MsgFlashErase.c

@@ -151,4 +151,4 @@ Suite *auto_check_sbp_flash_MsgFlashErase_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_flash_MsgFlashErase);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_flash_MsgFlashProgram.c

@@ -1692,4 +1692,4 @@ Suite *auto_check_sbp_flash_MsgFlashProgram_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_flash_MsgFlashProgram);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_flash_MsgFlashReadReq.c

@@ -173,4 +173,4 @@ Suite *auto_check_sbp_flash_MsgFlashReadReq_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_flash_MsgFlashReadReq);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_flash_MsgFlashReadResp.c

@@ -173,4 +173,4 @@ Suite *auto_check_sbp_flash_MsgFlashReadResp_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_flash_MsgFlashReadResp);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_flash_MsgM25FlashWriteStatus.c

@@ -145,4 +145,4 @@ Suite *auto_check_sbp_flash_MsgM25FlashWriteStatus_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_flash_MsgM25FlashWriteStatus);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_flash_MsgStmFlashLockSector.c

@@ -145,4 +145,4 @@ Suite *auto_check_sbp_flash_MsgStmFlashLockSector_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_flash_MsgStmFlashLockSector);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_flash_MsgStmFlashUnlockSector.c

@@ -145,4 +145,4 @@ Suite *auto_check_sbp_flash_MsgStmFlashUnlockSector_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_flash_MsgStmFlashUnlockSector);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_flash_MsgStmUniqueIdReq.c

@@ -137,4 +137,4 @@ Suite *auto_check_sbp_flash_MsgStmUniqueIdReq_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_flash_MsgStmUniqueIdReq);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_flash_MsgStmUniqueIdResp.c

@@ -223,4 +223,4 @@ Suite *auto_check_sbp_flash_MsgStmUniqueIdResp_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_flash_MsgStmUniqueIdResp);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_imu_MsgImuAux.c

@@ -155,4 +155,4 @@ Suite *auto_check_sbp_imu_MsgImuAux_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_imu_MsgImuAux);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_imu_MsgImuComp.c

@@ -192,4 +192,4 @@ Suite *auto_check_sbp_imu_MsgImuComp_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_imu_MsgImuComp);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_imu_MsgImuRaw.c

@@ -191,4 +191,4 @@ Suite *auto_check_sbp_imu_MsgImuRaw_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_imu_MsgImuRaw);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_integrity_MsgAcknowledge.c

@@ -181,4 +181,4 @@ Suite *auto_check_sbp_integrity_MsgAcknowledge_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_integrity_MsgAcknowledge);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_integrity_MsgSsrFlagHighLevel.c

@@ -307,4 +307,4 @@ Suite *auto_check_sbp_integrity_MsgSsrFlagHighLevel_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_integrity_MsgSsrFlagHighLevel);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_integrity_MsgSsrFlagIonoGridPointSatLos.c

@@ -277,4 +277,4 @@ Suite *auto_check_sbp_integrity_MsgSsrFlagIonoGridPointSatLos_suite(void) {
                  test_auto_check_sbp_integrity_MsgSsrFlagIonoGridPointSatLos);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_integrity_MsgSsrFlagIonoGridPoints.c

@@ -246,4 +246,4 @@ Suite *auto_check_sbp_integrity_MsgSsrFlagIonoGridPoints_suite(void) {
                  test_auto_check_sbp_integrity_MsgSsrFlagIonoGridPoints);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_integrity_MsgSsrFlagIonoTileSatLos.c

@@ -261,4 +261,4 @@ Suite *auto_check_sbp_integrity_MsgSsrFlagIonoTileSatLos_suite(void) {
                  test_auto_check_sbp_integrity_MsgSsrFlagIonoTileSatLos);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_integrity_MsgSsrFlagSatellites.c

@@ -225,4 +225,4 @@ Suite *auto_check_sbp_integrity_MsgSsrFlagSatellites_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_integrity_MsgSsrFlagSatellites);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_integrity_MsgSsrFlagTropoGridPoints.c

@@ -246,4 +246,4 @@ Suite *auto_check_sbp_integrity_MsgSsrFlagTropoGridPoints_suite(void) {
                  test_auto_check_sbp_integrity_MsgSsrFlagTropoGridPoints);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_linux_MsgLinuxCpuState.c

@@ -219,4 +219,4 @@ Suite *auto_check_sbp_linux_MsgLinuxCpuState_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_linux_MsgLinuxCpuState);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_linux_MsgLinuxCpuStateDepA.c

@@ -208,4 +208,4 @@ Suite *auto_check_sbp_linux_MsgLinuxCpuStateDepA_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_linux_MsgLinuxCpuStateDepA);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_linux_MsgLinuxMemState.c

@@ -219,4 +219,4 @@ Suite *auto_check_sbp_linux_MsgLinuxMemState_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_linux_MsgLinuxMemState);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_linux_MsgLinuxMemStateDepA.c

@@ -208,4 +208,4 @@ Suite *auto_check_sbp_linux_MsgLinuxMemStateDepA_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_linux_MsgLinuxMemStateDepA);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_linux_MsgLinuxProcessFdCount.c

@@ -186,4 +186,4 @@ Suite *auto_check_sbp_linux_MsgLinuxProcessFdCount_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_linux_MsgLinuxProcessFdCount);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_linux_MsgLinuxProcessFdSummary.c

@@ -205,4 +205,4 @@ Suite *auto_check_sbp_linux_MsgLinuxProcessFdSummary_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_linux_MsgLinuxProcessFdSummary);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_linux_MsgLinuxProcessSocketCounts.c

@@ -206,4 +206,4 @@ Suite *auto_check_sbp_linux_MsgLinuxProcessSocketCounts_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_linux_MsgLinuxProcessSocketCounts);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_linux_MsgLinuxProcessSocketQueues.c

@@ -260,4 +260,4 @@ Suite *auto_check_sbp_linux_MsgLinuxProcessSocketQueues_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_linux_MsgLinuxProcessSocketQueues);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_linux_MsgLinuxSocketUsage.c

@@ -416,4 +416,4 @@ Suite *auto_check_sbp_linux_MsgLinuxSocketUsage_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_linux_MsgLinuxSocketUsage);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_linux_MsgLinuxSysState.c

@@ -196,4 +196,4 @@ Suite *auto_check_sbp_linux_MsgLinuxSysState_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_linux_MsgLinuxSysState);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_linux_MsgLinuxSysStateDepA.c

@@ -186,4 +186,4 @@ Suite *auto_check_sbp_linux_MsgLinuxSysStateDepA_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_linux_MsgLinuxSysStateDepA);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_logging_MsgFwd.c

@@ -253,4 +253,4 @@ Suite *auto_check_sbp_logging_MsgFwd_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_logging_MsgFwd);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}

c/test/auto_check_sbp_logging_MsgLog.c

@@ -162,4 +162,4 @@ Suite *auto_check_sbp_logging_MsgLog_suite(void) {
   tcase_add_test(tc_acq, test_auto_check_sbp_logging_MsgLog);
   suite_add_tcase(s, tc_acq);
   return s;
-}
+}