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Refactor inference script #51

Merged
merged 42 commits into from
Jun 3, 2024
Merged

Refactor inference script #51

merged 42 commits into from
Jun 3, 2024

Commits on May 15, 2024

  1. add back-reference to frame as attribute for instane

    @aaprasad
    aaprasad committed May 15, 2024
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  2. separate get_boxes_times into two functions and use Instances as input

    @aaprasad
    aaprasad committed May 15, 2024
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  3. use instances as input into model instead of frames

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    aaprasad committed May 15, 2024
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Commits on May 16, 2024

  1. create io module, move config, visualize there. abstract Frame and … 

    …`Instance` classes into separate modules within `io`
    @aaprasad
    aaprasad committed May 16, 2024
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  2. refactor Frame and Instance initialization to use attrs instead… 

    … of `__init__`
    @aaprasad
    aaprasad committed May 16, 2024
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  3. add doc strings, fix small bugs

    @aaprasad
    aaprasad committed May 16, 2024
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  4. Implement AssociationMatrix class for handling model output

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    aaprasad committed May 16, 2024
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  5. create io module, move config, visualize there. abstract Frame and … 

    …`Instance` classes into separate modules within `io`
    @aaprasad
    aaprasad committed May 16, 2024
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  6. refactor Frame and Instance initialization to use attrs instead… 

    … of `__init__`
    @aaprasad
    aaprasad committed May 16, 2024
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  7. add doc strings, fix small bugs

    @aaprasad
    aaprasad committed May 16, 2024
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  8. Implement AssociationMatrix class for handling model output

    @aaprasad
    aaprasad committed May 16, 2024
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  9. Merge remote-tracking branch 'origin/aadi/refactor-data-structures' i… 

    …nto aadi/refactor-data-structures
    @aaprasad
    aaprasad committed May 16, 2024
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Commits on May 17, 2024

  1. fix overwrites from merge

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    aaprasad committed May 17, 2024
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  2. store model outputs in association matrix

    @aaprasad
    aaprasad committed May 17, 2024
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  3. add track object for storing tracklets

    @aaprasad
    aaprasad committed May 17, 2024
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Commits on May 20, 2024

  1. add reduction function to association matrix

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    aaprasad committed May 20, 2024
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  2. add doc_strings

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    aaprasad committed May 20, 2024
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  3. fix tests, docstrings

    @aaprasad
    aaprasad committed May 20, 2024
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  4. add spatial/temporal embeddings as attribute to Instance

    @aaprasad
    aaprasad committed May 20, 2024
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  5. fix typo

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    aaprasad committed May 20, 2024
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Commits on May 21, 2024

  1. add from_slp converters

    @aaprasad
    aaprasad committed May 21, 2024
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  2. fix docstrings

    @aaprasad
    aaprasad committed May 21, 2024
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  3. store embeddings in Instance object instead of returning

    @aaprasad
    aaprasad committed May 21, 2024
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  4. only keep visualize in io

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    aaprasad committed May 21, 2024
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  5. remove mutable types from default arguments. Don't use kwargs unless … 

    …necessary
    @aaprasad
    aaprasad committed May 21, 2024
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  6. handle edge case where ckpt_path is not in config

    @aaprasad
    aaprasad committed May 21, 2024
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  7. expose appropriate modules in respective __init__.py

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    aaprasad committed May 21, 2024
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Commits on May 27, 2024

  1. separate files into vid_files, label_files for finer grained co… 

    …ntrol
    @aaprasad
    aaprasad committed May 27, 2024
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  2. fix edge case for get trainer when trainer params don't exist

    @aaprasad
    aaprasad committed May 27, 2024
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  3. fix to_slp bugs stemming from type change

    @aaprasad
    aaprasad committed May 27, 2024
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  4. use tmp dir for tests

    @aaprasad
    aaprasad committed May 27, 2024
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  5. refactor inference script

    @aaprasad
    aaprasad committed May 27, 2024
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  6. add logic to handle directory paths instead of only file paths

    @aaprasad
    aaprasad committed May 27, 2024
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  7. add from_yaml classmethod for direct config loading

    @aaprasad
    aaprasad committed May 27, 2024
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  8. add documentation for cli calls

    @aaprasad
    aaprasad committed May 27, 2024
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  9. fix small typo + docstrings

    @aaprasad
    aaprasad committed May 27, 2024
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  10. fix docstring typo

    @aaprasad
    aaprasad committed May 27, 2024
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Commits on May 28, 2024

  1. fix small edge case when initializing new tracks

    @aaprasad
    aaprasad committed May 28, 2024
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  2. Update biogtr/datasets/base_dataset.py

    @talmo
    talmo authored May 28, 2024
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Commits on May 29, 2024

  1. lint

    @aaprasad
    aaprasad committed May 29, 2024
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Commits on Jun 3, 2024

  1. Merge branch 'main' into aadi/refactor-inference

    @aaprasad
    aaprasad authored Jun 3, 2024
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  2. lint post-merge

    @aaprasad
    aaprasad committed Jun 3, 2024
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