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full rebase
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major changes to the script

Major changes

Everything works

first of many

renamed

renamed
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@taracampbell @ridz1208
taracampbell authored and ridz1208 committed Feb 23, 2018
1 parent efeb72a commit 1693592
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156 changes: 78 additions & 78 deletions SQL/0000-00-01-Permission.sql
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Original file line number Diff line number Diff line change
@@ -1,45 +1,20 @@
SET FOREIGN_KEY_CHECKS=0;


DROP TABLE IF EXISTS `permissions`;


DROP TABLE IF EXISTS `permissions_category`;


DROP TABLE IF EXISTS `user_perm_rel`;
DROP TABLE IF EXISTS `permission_category`;
DROP TABLE IF EXISTS `permission_category_permissions_rel`;
DROP TABLE IF EXISTS `users_permission_category_rel`;

SET FOREIGN_KEY_CHECKS=1;
--
-- Table structure for table `permissions_category`
--


CREATE TABLE `permissions_category` (
`ID` int(10) NOT NULL AUTO_INCREMENT,
`Description` varchar(255) NOT NULL,
PRIMARY KEY (`ID`)
) ENGINE=InnoDB DEFAULT CHARSET=utf8;


INSERT INTO `permissions_category` VALUES
(1,'Roles'),
(2,'Permission');


CREATE TABLE `permissions` (
`permID` int(10) unsigned NOT NULL AUTO_INCREMENT,
`code` varchar(255) NOT NULL DEFAULT '',
`description` varchar(255) NOT NULL DEFAULT '',
`categoryID` int(10) NOT NULL DEFAULT '2',
PRIMARY KEY (`permID`),
UNIQUE KEY `code` (`code`),
KEY `fk_permissions_1_idx` (`categoryID`),
CONSTRAINT `fk_permissions_1`
FOREIGN KEY (`categoryID`)
REFERENCES `permissions_category` (`ID`)
ON DELETE NO ACTION
ON UPDATE NO ACTION
UNIQUE KEY `code` (`code`)
) ENGINE=InnoDB DEFAULT CHARSET=utf8;


Expand All @@ -62,55 +37,56 @@ CREATE TABLE `user_perm_rel` (


INSERT INTO `permissions` VALUES
(1,'superuser','There can be only one Highlander','1'),
(2,'user_accounts','User management','2'),
(3,'user_accounts_multisite','Across all sites create and edit users','2'),
(4,'context_help','Edit help documentation','2'),
(5,'bvl_feedback','Behavioural QC','1'),
(6,'imaging_browser_qc','Edit imaging browser QC status','2'),
(7,'mri_efax','Edit MRI Efax files','2'),
(8,'send_to_dcc','Send to DCC','2'),
(9,'unsend_to_dcc','Reverse Send from DCC','2'),
(10,'access_all_profiles','Across all sites access candidate profiles','2'),
(11,'data_entry','Data entry','1'),
(12,'examiner_view','Add and certify examiners','2'),
(13,'examiner_multisite','Across all sites add and certify examiners','2'),
(14,'training','View and complete training','2'),
(15,'timepoint_flag','Edit exclusion flags','2'),
(16,'timepoint_flag_evaluate','Evaluate overall exclusionary criteria for the timepoint','2'),
(17,'conflict_resolver','Resolving conflicts','2'),
(18,'data_dict_view','View Data Dictionary (Parameter type descriptions)','2'),
(19,'violated_scans_view_allsites','Violated Scans: View all-sites Violated Scans','2'),
(20,'violated_scans_edit','Violated Scans: Edit MRI protocol table','2'),
(21,'data_integrity_flag','Data Integrity Flag','2'),
(22,'config','Edit configuration settings','2'),
(23,'imaging_browser_view_site','View own-site Imaging Browser pages','2'),
(24,'imaging_browser_view_allsites', 'View all-sites Imaging Browser pages', '2'),
(25,'dicom_archive_view_allsites', 'Across all sites view Dicom Archive module and pages', '2'),
(26,'reliability_edit_all', 'Access and Edit all Reliability profiles', '2'),
(27,'reliability_swap_candidates', 'Swap Reliability candidates across all sites', '2'),
(28,'instrument_builder', 'Instrument Builder: Create and Edit instrument forms', '2'),
(29,'data_dict_edit','Edit Data Dictionary','2'),
(30,'data_team_helper','Data Team Helper','2'),
(31,'candidate_parameter_view','View Candidate Parameters','2'),
(32,'candidate_parameter_edit','Edit Candidate Parameters','2'),
(33,'genomic_browser_view_site','View Genomic Browser data from own site','2'),
(34,'genomic_browser_view_allsites','View Genomic Browser data across all sites','2'),
(35,'document_repository_view','View and upload files in Document Repository','2'),
(36,'document_repository_delete','Delete files in Document Repository','2'),
(37,'server_processes_manager','View and manage server processes','2'),
(38,'imaging_uploader','Imaging Uploader','2'),
(39,'acknowledgements_view','View Acknowledgements','2'),
(40,'acknowledgements_edit','Edit Acknowledgements','2'),
(41,'dataquery_view','View Data Query Tool','2'),
(42,'genomic_data_manager','Manage the genomic files','2'),
(43,'media_write','Media files: Uploading/Downloading/Editing','2'),
(44,'media_read','Media files: Browsing','2'),
(45,'issue_tracker_reporter', 'Can add a new issue, edit own issue, comment on all', 2),
(46,'issue_tracker_developer', 'Can re-assign issues, mark issues as closed, comment on all, edit issues.', 2),
(47,'imaging_browser_phantom_allsites', 'Can access only phantom data from all sites in Imaging Browser', 2),
(48,'imaging_browser_phantom_ownsite', 'Can access only phantom data from own site in Imaging Browser', 2);

(1,'superuser','There can be only one Highlander'),
(2,'user_accounts','User management'),
(3,'user_accounts_multisite','Across all sites create and edit users'),
(4,'context_help','Edit help documentation'),
(5,'bvl_feedback','Behavioural QC'),
(6,'imaging_browser_qc','Edit imaging browser QC status'),
(7,'mri_efax','Edit MRI Efax files'),
(8,'send_to_dcc','Send to DCC'),
(9,'unsend_to_dcc','Reverse Send from DCC'),
(10,'access_all_profiles','Across all sites access candidate profiles'),
(11,'data_entry','Data entry'),
(12,'examiner_view','Add and certify examiners'),
(13,'examiner_multisite','Across all sites add and certify examiners'),
(14,'training','View and complete training'),
(15,'timepoint_flag','Edit exclusion flags'),
(16,'timepoint_flag_evaluate','Evaluate overall exclusionary criteria for the timepoint'),
(17,'conflict_resolver','Resolving conflicts'),
(18,'data_dict_view','View Data Dictionary (Parameter type descriptions)'),
(19,'violated_scans_view_allsites','Violated Scans: View all-sites Violated Scans'),
(20,'violated_scans_edit','Violated Scans: Edit MRI protocol table'),
(21,'data_integrity_flag','Data Integrity Flag'),
(22,'config','Edit configuration settings'),
(23,'edit_final_radiological_review','Can edit final radiological reviews'),
(24,'view_final_radiological_review','Can see final radiological reviews'),
(25,'imaging_browser_view_site','View own-site Imaging Browser pages'),
(26,'imaging_browser_view_allsites', 'View all-sites Imaging Browser pages'),
(27,'dicom_archive_view_allsites', 'Across all sites view Dicom Archive module and pages'),
(28,'reliability_edit_all', 'Access and Edit all Reliability profiles'),
(29,'reliability_swap_candidates', 'Swap Reliability candidates across all sites'),
(30,'instrument_builder', 'Instrument Builder: Create and Edit instrument forms'),
(31,'data_dict_edit','Edit Data Dictionary'),
(32,'data_team_helper','Data Team Helper'),
(33,'candidate_parameter_view','View Candidate Parameters'),
(34,'candidate_parameter_edit','Edit Candidate Parameters'),
(35,'genomic_browser_view_site','View Genomic Browser data from own site'),
(36,'genomic_browser_view_allsites','View Genomic Browser data across all sites'),
(37,'document_repository_view','View and upload files in Document Repository'),
(38,'document_repository_delete','Delete files in Document Repository'),
(39,'server_processes_manager','View and manage server processes'),
(40,'imaging_uploader','Imaging Uploader'),
(41,'acknowledgements_view','View Acknowledgements'),
(42,'acknowledgements_edit','Edit Acknowledgements'),
(43,'dataquery_view','View Data Query Tool'),
(44,'genomic_data_manager','Manage the genomic files'),
(45,'media_write','Media files: Uploading/Downloading/Editing'),
(46,'media_read','Media files: Browsing'),
(47,'issue_tracker_reporter', 'Can add a new issue, edit own issue, comment on all'),
(48,'issue_tracker_developer', 'Can re-assign issues, mark issues as closed, comment on all, edit issues.'),
(49,'imaging_browser_phantom_allsites', 'Can access only phantom data from all sites in Imaging Browser'),
(50,'imaging_browser_phantom_ownsite', 'Can access only phantom data from own site in Imaging Browser');

INSERT INTO `user_perm_rel` (userID, permID)
SELECT u.ID, p.permID
Expand All @@ -131,3 +107,27 @@ CREATE TABLE `notification_modules_perm_rel` (
-- populate notification perm table
INSERT INTO notification_modules_perm_rel SELECT nm.id, p.permID FROM notification_modules nm JOIN permissions p WHERE nm.module_name='media' AND (p.code='media_write' OR p.code='media_read');
INSERT INTO notification_modules_perm_rel SELECT nm.id, p.permID FROM notification_modules nm JOIN permissions p WHERE nm.module_name='document_repository' AND (p.code='document_repository_view' OR p.code='document_repository_delete');

CREATE TABLE `permission_category` (
`PermissionCategoryID` INTEGER unsigned NOT NULL AUTO_INCREMENT,
`Category` varchar(255),
`Label` varchar(255),
PRIMARY KEY (`PermissionCategoryID`),
UNIQUE KEY `UK_Category` (`Category`)
) ENGINE=InnoDB DEFAULT CHARSET=utf8;

CREATE TABLE `permission_category_permissions_rel` (
`PermissionCategoryID` INTEGER unsigned NOT NULL,
`PermissionID` INTEGER unsigned NOT NULL,
PRIMARY KEY (`PermissionCategoryID`,`PermissionID`),
CONSTRAINT `FK_permission_category_permissions_rel_PermissionCategoryID` FOREIGN KEY (`PermissionCategoryID`) REFERENCES `permission_category` (`PermissionCategoryID`) ON DELETE CASCADE ON UPDATE CASCADE,
CONSTRAINT `FK_permission_category_permissions_rel_PermissionID` FOREIGN KEY (`PermissionID`) REFERENCES `permissions` (`permID`) ON DELETE CASCADE ON UPDATE CASCADE
) ENGINE=InnoDB DEFAULT CHARSET=utf8;

CREATE TABLE `users_permission_category_rel` (
`UserID` INTEGER unsigned NOT NULL,
`PermissionCategoryID` INTEGER unsigned NOT NULL,
PRIMARY KEY (`UserID`,`PermissionCategoryID`),
CONSTRAINT `FK_users_permission_category_rel_userID` FOREIGN KEY (`userID`) REFERENCES `users` (`ID`) ON DELETE CASCADE ON UPDATE CASCADE,
CONSTRAINT `FK_users_permission_category_rel_PermissionCategoryID` FOREIGN KEY (`PermissionCategoryID`) REFERENCES `permission_category` (`PermissionCategoryID`) ON DELETE CASCADE ON UPDATE CASCADE
) ENGINE=InnoDB DEFAULT CHARSET=utf8;
29 changes: 29 additions & 0 deletions SQL/Archive/2017-03-10-addUserAccountsRoles.sql
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Original file line number Diff line number Diff line change
@@ -0,0 +1,29 @@
ALTER TABLE `permissions` DROP FOREIGN KEY `fk_permissions_1`;
ALTER TABLE `permissions` DROP INDEX `fk_permissions_1_idx`;
ALTER TABLE `permissions` DROP COLUMN `categoryID`;

DROP TABLE `permissions_category`;

CREATE TABLE `permission_category` (
`PermissionCategoryID` INTEGER unsigned NOT NULL AUTO_INCREMENT,
`Category` varchar(255),
`Label` varchar(255),
PRIMARY KEY (`PermissionCategoryID`),
UNIQUE KEY `UK_Category` (`Category`)
) ENGINE=InnoDB DEFAULT CHARSET=utf8;

CREATE TABLE `permission_category_permissions_rel` (
`PermissionCategoryID` INTEGER unsigned NOT NULL,
`PermissionID` INTEGER unsigned NOT NULL,
PRIMARY KEY (`PermissionCategoryID`,`PermissionID`),
CONSTRAINT `FK_permission_category_permissions_rel_PermissionCategoryID` FOREIGN KEY (`PermissionCategoryID`) REFERENCES `permission_category` (`PermissionCategoryID`) ON DELETE CASCADE ON UPDATE CASCADE,
CONSTRAINT `FK_permission_category_permissions_rel_PermissionID` FOREIGN KEY (`PermissionID`) REFERENCES `permissions` (`permID`) ON DELETE CASCADE ON UPDATE CASCADE
) ENGINE=InnoDB DEFAULT CHARSET=utf8;

CREATE TABLE `users_permission_category_rel` (
`UserID` INTEGER unsigned NOT NULL,
`PermissionCategoryID` INTEGER unsigned NOT NULL,
PRIMARY KEY (`UserID`,`PermissionCategoryID`),
CONSTRAINT `FK_users_permission_category_rel_userID` FOREIGN KEY (`userID`) REFERENCES `users` (`ID`) ON DELETE CASCADE ON UPDATE CASCADE,
CONSTRAINT `FK_users_permission_category_rel_PermissionCategoryID` FOREIGN KEY (`PermissionCategoryID`) REFERENCES `permission_category` (`PermissionCategoryID`) ON DELETE CASCADE ON UPDATE CASCADE
) ENGINE=InnoDB DEFAULT CHARSET=utf8;
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