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After updating tarantool sdk version to the 3.2.0 stopping instance in `test_running_env_variables` causes an error with cleaning all logs in json format that was written before. So it wasn't possible to determine json format after stopping instance. After the patch the order of distructing tarantool was moved to the special `finally` block. Determination of json format was also updated with `wait_string_in_file` function with special timeout. Part of #931
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