update

taxonomicallyinformedannotation · Jul 10, 2023 · cdf7aa3 · cdf7aa3
1 parent 03fadd4
commit cdf7aa3
Show file tree

Hide file tree

Showing 3 changed files with 7 additions and 3 deletions.
diff --git a/.github/workflows/test-coverage.yaml b/.github/workflows/test-coverage.yaml
@@ -32,6 +32,9 @@ jobs:
  with:
  extra-packages: any::covr
  needs: coverage
+ - name: Install package
+ run: |
+ Rscript inst/scripts/install.R
  - name: Test coverage
  run: |
  covr::codecov(

diff --git a/tests/testthat.R b/tests/testthat.R
@@ -1,3 +1,4 @@
 library(testthat)
+library(timaR)
 
 testthat::test_check(package = "timaR")
diff --git a/tests/testthat/test_functions.R b/tests/testthat/test_functions.R
@@ -11,9 +11,9 @@ testthat::test_that("Whole process", {
  cp paths.yaml inst/paths.yaml
  "
  )
- ## Sourcing all functions
- list.files("R", full.names = TRUE) |>
- lapply(FUN = source)
+ # ## Sourcing all functions
+ # list.files("R", full.names = TRUE) |>
+ #  lapply(FUN = source)
 
  ## Prepare parameters
  paths <<- parse_yaml_paths()