Merge pull request #61 from the-virtual-brain/VT-40 #456
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| name: Run Python tests | |
| on: | |
| push: | |
| branches: | |
| - 'dev' | |
| pull_request: | |
| types: [ opened, synchronize, reopened ] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: [ "3.8", "3.11", "3.12" ] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Set Branch Name | |
| run: | | |
| echo "branch_name=${GITHUB_HEAD_REF##*/}" >> $GITHUB_ENV | |
| - name: Sanitize Branch Name and Git Hash | |
| run: | | |
| sanitized_branch_name=$(echo "$branch_name" | sed 's/[^a-zA-Z0-9_-]/_/g') # Preserving hyphens | |
| sanitized_git_hash=$(git rev-parse --short "$GITHUB_SHA" | sed 's/[^a-zA-Z0-9_-]/_/g') # Preserving hyphens | |
| echo "sanitized_branch_name=$sanitized_branch_name" >> $GITHUB_ENV | |
| echo "sanitized_git_hash=$sanitized_git_hash" >> $GITHUB_ENV | |
| - name: Check Branch and Hash | |
| run: | | |
| echo "Branch: $sanitized_branch_name" | |
| echo "Hash: $sanitized_git_hash" | |
| - name: Setup Node.js | |
| uses: actions/setup-node@v4 | |
| with: | |
| node-version: 20 | |
| - name: Install React-collapsed | |
| run: npm install react-collapsed | |
| - name: Install Yarn | |
| run: | | |
| npm install --global yarn | |
| yarn -v | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install setuptools | |
| pip install "jupyterlab>=4.0.0,<5" -U pytest pytest-cov pytest-mock | |
| - name: Install Node.js dependencies | |
| run: jlpm install | |
| - name: Build Extension in Dev Mode | |
| run: | | |
| pip install -e .[full] | |
| - name: Run tests | |
| run: | | |
| pytest tvbextxircuits -r ap | |
| sonar_cloud: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Setup Node.js | |
| uses: actions/setup-node@v4 | |
| with: | |
| node-version: '18' | |
| - name: Setup Build Env | |
| run: | | |
| npm install --global yarn | |
| npm install react-collapsed | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -U pytest pytest-cov pytest-mock | |
| - name: Compute coverage | |
| run: | | |
| python -m pip install .[full,test] | |
| pytest -v --cov --cov-report=xml:coverage.xml tvbextxircuits | |
| - name: SonarCloud Scan | |
| uses: sonarsource/sonarcloud-github-action@master | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| SONAR_TOKEN: ${{ secrets.SONAR_TOKEN }} |