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Fix/anndata serialization #1122

Merged
merged 4 commits into from
Sep 20, 2023
Merged

Fix/anndata serialization #1122

merged 4 commits into from
Sep 20, 2023

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michalk8
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Description

Fix Lineage class serialization, bump anndata>=0.9.

How has this been tested?

1 new test.

Closes

closes #1086

@michalk8 michalk8 added the bugfix PR fixes a bug label Sep 19, 2023
@michalk8 michalk8 self-assigned this Sep 19, 2023
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codecov bot commented Sep 19, 2023

Codecov Report

Merging #1122 (a2d9717) into main (bd35386) will decrease coverage by 0.03%.
The diff coverage is 100.00%.

Additional details and impacted files

Impacted file tree graph

@@            Coverage Diff             @@
##             main    #1122      +/-   ##
==========================================
- Coverage   80.62%   80.59%   -0.03%     
==========================================
  Files          51       51              
  Lines        8484     8483       -1     
  Branches     2218     2218              
==========================================
- Hits         6840     6837       -3     
- Misses       1102     1103       +1     
- Partials      542      543       +1     
Files Changed Coverage Δ
src/cellrank/_utils/_lineage.py 84.89% <100.00%> (+0.13%) ⬆️

... and 1 file with indirect coverage changes

@michalk8 michalk8 merged commit c3ced63 into main Sep 20, 2023
@michalk8 michalk8 deleted the fix/anndata-serialization branch September 20, 2023 08:57
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Successfully merging this pull request may close these issues.

Error when saving anndata to disk after running cellrank
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