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Merge pull request #105 from theislab/dev
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added fit module into docs
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davidsebfischer authored Aug 21, 2019
2 parents 062161d + fc5c6bf commit 5be8684
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Expand Up @@ -69,3 +69,18 @@ Enrichment tests
:toctree: .

enrich.test

Fit model to gene expression: fit
---------------------------------

Diffxpy allows the user to fit models to gene expression only without conducting Wald or likelihood ratio tests.
Note that one can also extract similar model fits from differential expression test output objects if Wald or likelihood ratio test were used.
Alternatively, residuals can also be directly computed.
As for differential expression tests, the fitting can be distributed across multiple partitions of the data set (such as conditions or cell types).

.. autosummary::
:toctree: .

fit.model
fit.residuals
fit.partition

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