Refactoring

Signed-off-by: zethson <lukas.heumos@posteo.net>
theislab · Feb 7, 2024 · cf10908 · cf10908
1 parent 5a5a864
commit cf10908
Showing 1 changed file with 0 additions and 8 deletions.
diff --git a/modules/multi_demultiplexing.nf b/modules/multi_demultiplexing.nf
@@ -69,9 +69,7 @@ workflow run_multi{
     main:
 
         if (params.mode == "genetic"){
-            // Performing genetic demultiplexing methodologies
             gene_demultiplexing(input_channel)
-            ////////////
 
             if (params.match_donor == "True"){
 
@@ -80,20 +78,16 @@ workflow run_multi{
         }
         else if (params.mode == "hashing"){
 
-            // Performing hashing demultplexing
             hash_demultiplexing(input_channel)
-            ////////////
 
             if (params.match_donor == "True"){
                 input_channel.splitCsv(header:true).map { row -> tuple(row.sampleId, row.nsample, row.barcodes, "None", "None")}.join(hash_demultiplexing.out).set{dm_input}
             }
         }
         else if (params.mode == "rescue"){
 
-            // Performing both hashing and genetic demultiplexing methods
             hash_demultiplexing(input_channel)
             gene_demultiplexing(input_channel)
-            ////////////
 
             gene_summary = gene_demultiplexing.out
             hash_summary = hash_demultiplexing.out
@@ -106,11 +100,9 @@ workflow run_multi{
 
         }
         else if (params.mode == "donor_match"){
-            // Performing just donor matching
             input_channel.splitCsv(header:true).map { row -> tuple(row.sampleId, row.nsample, row.barcodes, row.celldata, row.vireo_parent_dir, row.demultiplexing_result)}.set{dm_input}
         }
 
-
         if (params.match_donor == "True" || params.mode == "donor_match"){
             donor_match(dm_input)