Skip to content

Issues: theislab/ncem

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

17 Open 18 Closed
17 Open 18 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Cell2location workflow, normalized for abundance? question Further information is requested
#165 opened Sep 19, 2024 by Dillon214
Interpreting Results from NCEM: Obtaining Ligand-Receptor Pairs question Further information is requested
#164 opened Jul 11, 2024 by hahia
1877 del celldata.uns["spatial"] - error bug Something isn't working
#163 opened Mar 25, 2024 by spatts14
Update required: extend_formula_ncem
#162 opened Mar 21, 2024 by merelkuijs
Question about r2 values question Further information is requested
#160 opened Dec 13, 2023 by showvikbiswas
Trouble installing on python 3.10 bug Something isn't working
#159 opened Sep 25, 2023 by ivirshup
6
Almost zero documentation for the training modules API documentation Improvements or additions to documentation enhancement New feature or request
#152 opened Jun 20, 2023 by arunchakra
3
Work with 10X Visium Estimator question Further information is requested
#149 opened Apr 3, 2023 by junyho486
LinAlgError: SVD did not converge bug Something isn't working
#148 opened Mar 27, 2023 by Chuang1118
2
Naive Question question Further information is requested
#147 opened Mar 24, 2023 by Chuang1118
QuestionInternalError: Graph execution error: question Further information is requested
#144 opened Mar 2, 2023 by Lixinyoung
1
How to run NCEM for CODEX csv/or FCS output data? question Further information is requested
#131 opened Nov 10, 2022 by DRSEI
2
Issue installing ncem on macOS dependencies Pull requests that update a dependency file
#130 opened Oct 31, 2022 by DRSEI
compatibility with 10x visium question Further information is requested
#126 opened Oct 9, 2022 by wangjiawen2013
4
How to run NCEM for own spatial data? question Further information is requested
#107 opened Jul 17, 2022 by ankitbioinfo
3
structure in dataloader and base estimator enhancement New feature or request
#59 opened Nov 15, 2021 by AnnaChristina
3 tasks
@davidsebfischer @AnnaChristina
ReadTheDocs improvements enhancement New feature or request
#17 opened Jul 9, 2021 by davidsebfischer
1 of 5 tasks
@davidsebfischer
ProTip! Follow long discussions with comments:>50.