Automated autoyapf fixes

theosanderson · May 18, 2022 · 2c2a918 · 2c2a918 · vercel · May 18, 2022
1 parent b915785
commit 2c2a918
Showing 1 changed file with 4 additions and 3 deletions.
diff --git a/taxoniumtools/src/taxoniumtools/utils.py b/taxoniumtools/src/taxoniumtools/utils.py
@@ -40,7 +40,8 @@ def read_metadata(metadata_file, columns):
 
 
 def do_chronumental(mat, chronumental_reference_node, metadata_file,
- chronumental_steps, chronumental_date_output,chronumental_tree_output):
+ chronumental_steps, chronumental_date_output,
+ chronumental_tree_output):
  chronumental_is_available = os.system(
  "which chronumental > /dev/null") == 0
  if not chronumental_is_available:
@@ -75,8 +76,8 @@ def do_chronumental(mat, chronumental_reference_node, metadata_file,
  "timetree.nwk"),
  schema="newick")
  if chronumental_tree_output:
- shutil.copy2(os.path.join(tmpdirname,
-  "timetree.nwk"), chronumental_tree_output)
+ shutil.copy2(os.path.join(tmpdirname, "timetree.nwk"),
+ chronumental_tree_output)
  time_tree_iter = ushertools.preorder_traversal(time_tree.root)
  for i, node in alive_it(enumerate(
  ushertools.preorder_traversal(mat.tree.root)),