Interface to the Global Biodiversity Information Facility API

Species occurrence data toolkit for R

⚠️ ARCHIVED ⚠️ Clean species occurrence records

An R Package for Managing Species Records from Biological Collections

Materials for the Workshop "Big Data Ecology"

⚠️ ARCHIVED ⚠️ Read Darwin Core Archive files

Get species occurrence data from speciesLink and GBIF, and species lists from the Brazilian Flora 2020. Perform basic taxonomic checks based on Brazilian Flora 2020. Download GADM, WDPA and DIVA-GIS gazetteer shapefiles.

A pipeline for phylogenetic diversity analysis of GBIF-mediated data

R package to merge the NCBI taxonomy and the GBIF backbone taxonomy

Shiny app to explore issues in occurrence records from a GBIF DwC download

Utilize R and GBIF to automatically download data and run optimized MaxEnt models for multiple species.

Shiny app that takes locations from transcription that are not clear and matches them to known locations. Runs an approximate match using databases from EMu and GBIF.

Ecological Niche Modeling on Docker

R Package to explore datasets from the biodivesity aggregator GBIF. Digitization Program Office, OCIO

R-Shiny dashboard offering visualisations of species occurrence data extracted from multiple open-access biodiversity information systems ...

Biodiversity Viewer

Artsdatabanken, artsobservasjoner og Adobe Lightroom

Retrieve GBIF taxon keys for use in the early alert tool. Detect changes in the GBIF Backbone taxonomy.

Additional data and scripts for data set and data paper.

Code for work on UKOT plant horizon scanning materials