Fix UndefinedVar warnings during Docker build #38
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| name: Test notebooks | |
| on: | |
| pull_request: | |
| push: | |
| workflow_dispatch: | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout the repository | |
| uses: actions/checkout@v4 | |
| - name: Set up Docker Buildx | |
| uses: docker/setup-buildx-action@v3 | |
| - name: Build and export | |
| uses: docker/build-push-action@v6 | |
| with: | |
| tags: madminer-jupyter-env:latest | |
| outputs: type=docker,dest=/tmp/image.tar | |
| cache-from: type=gha | |
| cache-to: type=gha | |
| - name: Upload the image as an artifact | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: image | |
| path: /tmp/image.tar | |
| tutorial_particle_physics_1: | |
| needs: build | |
| if: ${{ !cancelled() && !failure() }} | |
| uses: ./.github/workflows/run-tutorial-notebook.yml | |
| with: | |
| working-directory: examples/tutorial_particle_physics | |
| notebook: 1_setup.ipynb | |
| outputs: data/setup.h5 | |
| tutorial_particle_physics_2a: | |
| needs: tutorial_particle_physics_1 | |
| if: ${{ !cancelled() && !failure() }} | |
| uses: ./.github/workflows/run-tutorial-notebook.yml | |
| with: | |
| working-directory: examples/tutorial_particle_physics | |
| notebook: 2a_parton_level_analysis.ipynb | |
| outputs: >- | |
| data/lhe_data_shuffled.h5 | |
| data/lhe_data.h5 | |
| tutorial_particle_physics_2b: | |
| needs: tutorial_particle_physics_1 | |
| if: ${{ !cancelled() && !failure() }} | |
| uses: ./.github/workflows/run-tutorial-notebook.yml | |
| with: | |
| working-directory: examples/tutorial_particle_physics | |
| notebook: 2b_delphes_level_analysis.ipynb | |
| outputs: >- | |
| data/delphes_data_shuffled.h5 | |
| data/delphes_data.h5 | |
| tutorial_particle_physics_3a: | |
| needs: tutorial_particle_physics_2a | |
| if: ${{ !cancelled() && !failure() }} | |
| uses: ./.github/workflows/run-tutorial-notebook.yml | |
| with: | |
| working-directory: examples/tutorial_particle_physics | |
| notebook: 3a_likelihood_ratio.ipynb | |
| outputs: >- | |
| models/alices_pt_settings.json | |
| models/alices_pt_state_dict.pt | |
| models/alices_pt_theta_means.npy | |
| models/alices_pt_theta_stds.npy | |
| models/alices_pt_x_means.npy | |
| models/alices_pt_x_stds.npy | |
| models/alices_settings.json | |
| models/alices_state_dict.pt | |
| models/alices_theta_means.npy | |
| models/alices_theta_stds.npy | |
| models/alices_x_means.npy | |
| models/alices_x_stds.npy | |
| tutorial_particle_physics_3b: | |
| needs: tutorial_particle_physics_2a | |
| if: ${{ !cancelled() && !failure() }} | |
| uses: ./.github/workflows/run-tutorial-notebook.yml | |
| with: | |
| working-directory: examples/tutorial_particle_physics | |
| notebook: 3b_score.ipynb | |
| outputs: >- | |
| models/sally_settings.json | |
| models/sally_state_dict.pt | |
| models/sally_x_means.npy | |
| models/sally_x_stds.npy | |
| tutorial_particle_physics_3c: | |
| needs: tutorial_particle_physics_2a | |
| if: ${{ !cancelled() && !failure() }} | |
| uses: ./.github/workflows/run-tutorial-notebook.yml | |
| with: | |
| working-directory: examples/tutorial_particle_physics | |
| notebook: 3c_likelihood.ipynb | |
| outputs: >- | |
| models/scandal_settings.json | |
| models/scandal_state_dict.pt | |
| models/scandal_theta_means.npy | |
| models/scandal_theta_stds.npy | |
| models/scandal_x_means.npy | |
| models/scandal_x_stds.npy | |
| tutorial_particle_physics_4a: | |
| # "no SCANDAL" (w/o 3c) as in the output of the current notebook. | |
| needs: [tutorial_particle_physics_3a, tutorial_particle_physics_3b] | |
| if: ${{ !cancelled() && !failure() }} | |
| uses: ./.github/workflows/run-tutorial-notebook.yml | |
| with: | |
| working-directory: examples/tutorial_particle_physics | |
| notebook: 4a_limits.ipynb | |
| outputs: limits/limits.npy | |
| tutorial_particle_physics_4b: | |
| needs: [tutorial_particle_physics_3a, tutorial_particle_physics_3b] | |
| if: ${{ !cancelled() && !failure() }} | |
| uses: ./.github/workflows/run-tutorial-notebook.yml | |
| with: | |
| working-directory: examples/tutorial_particle_physics | |
| notebook: 4b_fisher_information.ipynb | |
| tutorial_particle_physics_4c: | |
| needs: tutorial_particle_physics_4a | |
| if: ${{ !cancelled() && !failure() }} | |
| uses: ./.github/workflows/run-tutorial-notebook.yml | |
| with: | |
| working-directory: examples/tutorial_particle_physics | |
| notebook: 4c_information_geometry.ipynb | |
| tutorial_particle_physics_a1: | |
| needs: tutorial_particle_physics_1 | |
| if: ${{ !cancelled() && !failure() }} | |
| uses: ./.github/workflows/run-tutorial-notebook.yml | |
| with: | |
| working-directory: examples/tutorial_particle_physics | |
| notebook: A1_systematic_uncertainties.ipynb | |
| outputs: >- | |
| data/lhe_data_systematics.h5 | |
| data/setup_systematics.h5 | |
| tutorial_particle_physics_a2: | |
| needs: build | |
| if: ${{ !cancelled() && !failure() }} | |
| uses: ./.github/workflows/run-tutorial-notebook.yml | |
| with: | |
| working-directory: examples/tutorial_particle_physics | |
| notebook: A2_ensemble_methods.ipynb | |
| tutorial_particle_physics_a3: | |
| needs: tutorial_particle_physics_1 | |
| if: ${{ !cancelled() && !failure() }} | |
| uses: ./.github/workflows/run-tutorial-notebook.yml | |
| with: | |
| working-directory: examples/tutorial_particle_physics | |
| notebook: A3_reweighting_existing_samples.ipynb | |
| outputs: data/setup_with_extra_benchmark.h5 | |
| tutorial_particle_physics_a4: | |
| needs: tutorial_particle_physics_3a | |
| if: ${{ !cancelled() && !failure() }} | |
| uses: ./.github/workflows/run-tutorial-notebook.yml | |
| with: | |
| working-directory: examples/tutorial_particle_physics | |
| notebook: A4_lh_nosyst.ipynb | |
| tutorial_particle_physics_a5: | |
| needs: tutorial_particle_physics_a1 | |
| if: ${{ !cancelled() && !failure() }} | |
| uses: ./.github/workflows/run-tutorial-notebook.yml | |
| with: | |
| working-directory: examples/tutorial_particle_physics | |
| notebook: A5_test_new_likelihood_module.ipynb | |
| tutorial_particle_physics_a6: | |
| needs: build | |
| if: ${{ !cancelled() && !failure() }} | |
| uses: ./.github/workflows/run-tutorial-notebook.yml | |
| with: | |
| working-directory: examples/tutorial_particle_physics | |
| notebook: A6_finite_differences.ipynb | |
| outputs: >- | |
| data/lhe_data_fd.h5 | |
| data/setup_fd.h5 |