Releases: ukhsa-collaboration/variant_definitions
Releases · ukhsa-collaboration/variant_definitions
1.4
1.4 - 2024-01-23
Added
nutrient-magnesium
: Added definition for V-23DEC-01 (JN.1)
1.3.1
1.3.1 - 2023-09-15
Updated
imagines-viewable
: Changed definition for V-22JAN-01 (BA.2) to reduce impact of requirement for Spike Q493R to allow child variants to be called more efficiently
1.3
1.3 - 2023-08-23
Added
poppy-deed
: Added definition for V-23AUG-01 (BA.2.86)
1.2
1.2 - 2023-08-07
Added
wispy-subscript
: Added definition for V-23JUL-01 (EG.5.1)
1.1.1
1.11.1 - 2022-06-22
Changed
imagines-viewable
: Increased wildtype-allowed
for low-qc
definition from 0 to 1 in line with probable definition
handler-hypnosis
: Increased wildtype-allowed
for low-qc
definition from 0 to 1 in line with probable definition
1.1
1.1 - 2023-05-19
Added
handler-hypnosis
: Added definition for V-23APR-01 (XBB.1.16)
Changed
- Corrected description in
vertical-sworn
Release 1.0
1.0 - 2023-01-26
Added
legroom-finished
: Added definition for V-22SEP-01 (BA.4.6)
monologue-underling
: Added definition for V-22OCT-01 (BQ.1)
edge-talon
: Added definition for V-22OCT-02 (XBB)
gaming-talon
: Added definition for V-22DEC-01 (CH.1.1)
vertical-sworn
: Added definition for V-23JAN-01 (XBB.1.5)
Changed
- Updated MNP notation in yaml files. The full codon will now be included in
reference-base
and variant-base
for
any MNPs in the variants
section of the yaml. Unchanged nucleotides will be written as N
in the variant-base
field to indicate that a wildtype call is not required to assign the mutation as present.
animating-thermos.yml
: removed T21I from mutations required
carnival-shimmy.yml
: removed N501Y from mutations required and alternate probable mutations
habitable-pasty.yml
: mutations required for probable call increased from 5 to 6
- This repository will now be maintained for all signals currently monitored by UKHSA.
0.11
0.11 - 2022-08-01
Added
pampered-imagining
: Added definition for V-22JUL-01 (BA.2.75)
Changed
- Skipped two minor versions for internal consistency to 0.11
0.7
0.7 - 2022-02-03
Added
imagines-viewable
: Definition for VUI-22JAN-01 (BA.2)
Changed
pentagon-refining
: Reduced overlapping mutations to increase specificity vs VUI-22JAN-01 (BA.2)
0.6.1
2021-12-01
Changed
- Fixed numbering for deletion at 21986
- Fixed nomenclature issue with MNP S371L
- Updated PHE name to VOC